3D Structure for MGV-GENOME-0362715_CDS_0158 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 95.56 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0362715_CDS_0158 1 AcrVA5 0.71 View Alignment MGV-GENOME-0362715_CDS_0158 M I Q I Q D W E S S Q K I V V V D E N H H G T V Q V E V P K P G P Y K D E Y Y Q H A D C A I Y N L W V D E K Y R K Q G T (60)
M G + + + I + V ++QG
AcrVA5 M K I E -L -----------S -G -G Y I C Y S I --E ---------E D E V T I D M V E V T -T -K R Q G I
MGV-GENOME-0362715_CDS_0158 A R L L I E T A E R E A K K L G C K S A Q L E W D -D -K -G S K P F V L A W Y K R L G Y R V M A R N E N G R L L L V K (120)
LI+ + A+ + + L S ++ +Y L
AcrVA5 G S Q L I D M V K D V A R E V -G L P I G L Y A Y P Q D D S I S Q E D L I E F Y F S N D F E Y D P D D V D -G R L M R W
MGV-GENOME-0362715_CDS_0158 E L (122)
AcrVA5 -S
MGV-GENOME-0362715_CDS_0158 2 AcrIB1 0.70 View Alignment MGV-GENOME-0362715_CDS_0158 M I Q I Q D W ---E -S ----------------------------------------S -Q K I V V (60)
M + VV
AcrIB1 M E -S K N L R K L L N E Y E E I D I N E M L K N F R S I K N S G T K N D I E I F L H E K A I K F E K S S I S S T Y V V
MGV-GENOME-0362715_CDS_0158 V -D E -N H H G T V Q V E V P K P G P Y -K ---D E Y Y ---------------Q ----H -A D C A I Y N L (120)
++ G ++ K + ++ +L
AcrIB1 F S E D N E I L G Y F T I A N R S L -V I P K E N F G I L S K T Q Q K K L G N S A A I L K N G D L M -T S S F L L G Q L
MGV-GENOME-0362715_CDS_0158 W V D E -K Y -R K Q G T ----A -R -L L I -E -T A E R -E A K K L G C K S A Q L E W D D K G S K P F V L A W Y K (180)
T + + K + LE P ++ +Y
AcrIB1 G K N Y S D D I E N L I T G R E L -L -T F A -Y -D L F L -K I K E L I N V K Y I W L E C Q --N -E P K L I S F Y Q
MGV-GENOME-0362715_CDS_0158 R L G Y R V M A R N --E N G R L L L V K E -L (204)
G + E G + + E
AcrIB1 N F G F K M L E S L T S E E G L K V M I M E L K
MGV-GENOME-0362715_CDS_0158 3 AcrIF5 0.43 View Alignment MGV-GENOME-0362715_CDS_0158 M I Q I Q D W E S S Q K I V V V D E -N H H G T V Q V E V P K P G P Y K D E Y Y ----Q H -A D C A I Y N L W V D E K (60)
M +V V E + Y +
AcrIF5 M S ------R -P T V V T V T E T P R -------------N P G -S Y E V N V E -R D G K M V V G R A -R A G
MGV-GENOME-0362715_CDS_0158 Y R K Q G T A R L L I E T A E R E A K K -L G C K S A Q L E W D D K G S K P F V L A W Y K R L G Y R V M A R N E N G R L (120)
+++ A A G + + +V A L
AcrIF5 ----S D P G A A A A K A M Q M A M E W -G S P N Y V I L G -----S ----------N -K V L A F I P E Q -L
MGV-GENOME-0362715_CDS_0158 L L V K E L (126)
AcrIF5 -R -V K M
MGV-GENOME-0362715_CDS_0158 4 AcrVIA1_Lse 0.40 View Alignment MGV-GENOME-0362715_CDS_0158 M I -Q I Q D W E S ----------------------S -Q K I V V V D --E N -H H G T V Q V -E V P K P G (60)
MI I D + +
AcrVIA1_Lse M I Y Y I K D L K V K G K I F E N L M N K E A V E G L I T F L K K A E F E I Y S R E N Y S K Y N K W F E M W -K --S P
MGV-GENOME-0362715_CDS_0158 P Y K D E Y Y Q H -A -D C A I Y N -L --W V -D E K Y R K Q G T A R L L I E -T A E -R -E A K -K -L G C K S A Q (120)
L G + +
AcrVIA1_Lse T S S L V -F W -K -N Y S F R C H L L F V I -E -K D G E C L G I ---P A -S V F -E -S V L -Q -I Y L A D -P -
MGV-GENOME-0362715_CDS_0158 L E W D D K G S -K P -F V L A W Y K R L G Y R -V M A ---R N ----E ----------------------(180)
D K V Y L V
AcrVIA1_Lse F A P D T K E -L F -V E V C N L Y E C L A D V T V V E H F E A E E S A W -H K L T H N E T E V S K R V Y S K D D D E L
MGV-GENOME-0362715_CDS_0158 ----------------------------N G ------------------------------ (240)
AcrVIA1_Lse L K Y I P E F L D T I A T N K K S Q K Y N Q I Q G K I Q E I N K E I A T L Y E S S E D Y I F T E Y V S N L Y R E S A K L
MGV-GENOME-0362715_CDS_0158 ----R -L L L V K E -L (254)
+L E
AcrVIA1_Lse E Q H S -K Q I L K E E L N
MGV-GENOME-0362715_CDS_0158 5 AcrIIC3 0.40 View Alignment MGV-GENOME-0362715_CDS_0158 M I Q I Q D W E S S Q K I V V V D -E -----N ----H H G T -V Q V -E V P -K P G P Y K D E Y Y Q H --A D C -(60)
M ++++ ++ + DEY
AcrIIC3 M F --------K R A I I F T S F N G F E K V S R T E K R R -L -A K I -I -N A R V S I I D E Y L R A K D T N A S
MGV-GENOME-0362715_CDS_0158 A ---I Y N L W V D E K Y R K Q G T A R L L I E T A E R E A K K L G C K S A Q L E W D D K G S K P F V L A W Y K R L G (120)
+ + + + + A S+ + + + + +
AcrIIC3 L D G Q Y R A F L F N D ---E S P A M T E F L A K L K A F A E S C T G I S I D A W E I E E S E Y V R L P V E R R D -F
MGV-GENOME-0362715_CDS_0158 Y R V M A R N E N G R L L L V K E L (138)
A G+ + +
AcrIIC3 L ---A A A N -G K E I -F -K I
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;