3D Structure for MGV-GENOME-0361850_CDS_0235 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 90.12 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0361850_CDS_0235 1 AcrIE6 0.77 View Alignment MGV-GENOME-0361850_CDS_0235 M C E Y Y E K L Q E N I K -E -T -K -A -A V E -D L N K H L E K I H H L Q K I T P ---Q E H -V E K H D E L K Q I (60)
M E L + +++ L + + D +
AcrIE6 M N N D T E V L E ----Q -Q -I -K -A F E -L L A D E L K D R L P T L E I L -S P M Y T A V M -V T Y D L I G K Q
MGV-GENOME-0361850_CDS_0235 E R E L -S N A L D Y Y E L A L E D L T R E E C M Y E Y F C S (91)
+++ E + C
AcrIE6 L A S R R A E L I E I L E E Q Y P G H A A D L -S I K N L C P
MGV-GENOME-0361850_CDS_0235 2 AcrIE1 0.67 View Alignment MGV-GENOME-0361850_CDS_0235 M C E ---Y -Y E -K -L Q ----------E ----N -I -K -E -T -K -A A V E D L N K -H L E K I H H L Q (60)
M L E ++V + + + L
AcrIE1 M E K K L S D A Q -V -A L V A A W R K Y P D L R E S L E E -A -A -S -I -L -S L I V F Q A -E T L S D Q A N E L A
MGV-GENOME-0361850_CDS_0235 K I T P Q E H V E K H D E L K Q I E R E L S -N A L D -Y Y E L A L -E D -L T R E E C -M Y E Y -F C S (113)
+E + + + R +
AcrIE1 N Y I R R Q G L E E A E G A C R N I D I M R A -K W V E V C G E V -N Q -H G I R V Y G D A I D -R D V D
MGV-GENOME-0361850_CDS_0235 3 AcrIIC4 0.61 View Alignment MGV-GENOME-0361850_CDS_0235 M C -E --Y Y E K ------L ------Q E -N I K E T K A A V E D L N K H L E K I H H L Q K I T P Q E H V -E K (60)
M K + + ++ K
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E P I K G L F K S A V E Q F S S A R D F F K N E N ----Y -S
MGV-GENOME-0361850_CDS_0235 H D E L K -Q -I E -R E L S N A L -D -Y -Y E -L -A -L -E D -L T -R E E -C M Y E Y F C S (110)
++ + A+ +
AcrIIC4 K E L A E K -F -N K E ----A V N -E -A -V E -K -L -Q K -A I -D L -A E K Q -G I Q -F
MGV-GENOME-0361850_CDS_0235 4 AcrIF23 0.56 View Alignment MGV-GENOME-0361850_CDS_0235 M C E Y Y E K --------L Q ---E --------N I K ----------------------------(60)
M +Q
AcrIF23 M T -N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y -D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T
MGV-GENOME-0361850_CDS_0235 -------E T -K -A ----A V E D L N K H L E K -I H ---H L Q K I T P Q E H V E K -H ----D E L K Q I E (120)
+E + P+ + +
AcrIF23 F G G R A L T G -T -A -R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A C D P S G L L T A A -K F W I E N R N D S A
MGV-GENOME-0361850_CDS_0235 R E L S -N A L D -Y -Y E -L -A L -------E --------D L T R E E C -M Y E -Y -F -C -S (174)
E+ + +L + E
AcrIF23 Q E I -A G F V -M -Q Q -K -A L L A Q H R S A K A A G Q A D K V A K I A A E Y N A L T -A -R -W -G F
MGV-GENOME-0361850_CDS_0235 5 AcrIF3 0.55 View Alignment MGV-GENOME-0361850_CDS_0235 M C -E Y Y E K L ----Q -E N I K --------------------E -T -K A A V E D L N K H -L E K I H H (60)
M +++ + + L +
AcrIF3 M S S T I S D R I I S R S -V I E A A R F I Q S W E D A D P D N L T E S Q V L -A -A S S F A A R L H E G L Q A T V L Q
MGV-GENOME-0361850_CDS_0235 L Q K I ----------------T P ----Q ---E H V E K H D E L K Q I E R E L S ----N A -L D -Y Y E (120)
I +
AcrIF3 R L V D E S N R D E Y R E F Q A W E E A L L N A D G R V T S N P F A D W G W W Y R I A N V M L A T A S Q N V G V A W G -
MGV-GENOME-0361850_CDS_0235 -L -A L E D L T R E -E C -M -Y E Y F -C --S (146)
+ L
AcrIF3 S -H V H G R L M A I F Q -D R F Q Q H Y E D E E C
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;