3D Structure for MGV-GENOME-0361750_CDS_0003 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 83.70 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0361750_CDS_0003 1 AcrIE6 0.74 View Alignment MGV-GENOME-0361750_CDS_0003 M D K -Y E E A V R I V N -N -Y V R R L K E C Y E N E C D I -V -G D K S K T P S V R A K H A R S A D E F Y T L Y S E (60)
M E + ++ + D + + D
AcrIE6 M N N D T E V L E ----Q -Q -I K A F E L L A D E L K D R L -P T L E I L S -P M Y T A V M V T Y D L I G K Q L A S
MGV-GENOME-0361750_CDS_0003 V N C I L H D I -I S L ---D K S --K -E --E S (87)
L +I
AcrIE6 R R A E L I E I L E E Q Y P G H A A D L S I K N L C P
MGV-GENOME-0361750_CDS_0003 2 AcrIE1 0.72 View Alignment MGV-GENOME-0361750_CDS_0003 M -D ---K -Y -E -E -A V -R ----------I --------V -N -N -Y V R R L K E C Y E N E C D I V G (60)
M + V + ++ +++
AcrIE1 M E K K L S D A -Q -V -A -L V A A W R K Y P D L R E -S L E E A A S I -L -S -L I V F Q A E T L S D Q A N E L A N
MGV-GENOME-0361750_CDS_0003 D K -S K T P S V R A K H A R S A D E F Y T L Y S E V N C I L H D I -I S L D K S -K -E -E S (108)
R++D EV + I +
AcrIE1 Y I R R Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I D R D V D
MGV-GENOME-0361750_CDS_0003 3 AcrIIC4 0.64 View Alignment MGV-GENOME-0361750_CDS_0003 M D -K Y E E A V -R ------------I --------V N N Y V R R L K E C Y E N E C D I V G D K S K T P S V (60)
M + + + E + D + + +
AcrIIC4 M K I T S S N -F A T I A T S E N F A K L S V -L P K N H R E P I K G L F K S A V E Q F S S A R D F F K N E N Y S K E L
MGV-GENOME-0361750_CDS_0003 R A K H A R S A -D E F Y T L Y S E V N C I L H D I I S L D K S K E -E S (97)
K + + +E+ L +I L
AcrIIC4 A E K ---F N K E ----A V N E A V E K L Q K A I D L A E K Q G I Q F
MGV-GENOME-0361750_CDS_0003 4 AcrIC3 0.57 View Alignment MGV-GENOME-0361750_CDS_0003 M -D K -Y E E A V ---R --------I V ---N -N ---Y V R R L K E C Y E ---N E C D I V G ----D K -(60)
M +V + + + E ++ G +
AcrIC3 M S I Q V T S T N G R T V -N L E I E L G S V V A S S -G Q V K F M A D K T D R G L E S R F L V P E A -G N R R I E V A
MGV-GENOME-0361750_CDS_0003 ---S -K T P S V R A K H A R S A D E F Y T L Y S E V N C I L H D I I S L D K S K E E S (105)
+ A A L E
AcrIC3 L T G -R D L E A A N A L F S E L A A S V E A T N E -M Y R E L D A E R A Q I N K A L E G
MGV-GENOME-0361750_CDS_0003 5 AcrIF3 0.56 View Alignment MGV-GENOME-0361750_CDS_0003 M -D -K Y E E A V ----R --------I V ----------------N N ----Y V R R L K E C Y E N -E (60)
M + ++ ++ L +
AcrIF3 M S S T I S D R I I S R S V I E A A R F I Q S W -E D A D P D N L T E S Q V L A A S S F A A R L H E G L Q A T V L Q R L
MGV-GENOME-0361750_CDS_0003 C D I V G D ---------K ---S ----K ---T P -S V R A K H A R S A D E F ---------Y T L Y S E V (120)
D + +P R A S V
AcrIF3 V D E S N R D E Y R E F Q A W E E A L L N A D G R V T S N P F A D W G W W Y R I A N V M L A T A S Q N V G V A W G S H V
MGV-GENOME-0361750_CDS_0003 N C I L H D I I -S -L -D K S -K -E -E -S (144)
L I + E E
AcrIF3 H G R L M A I F Q -D -R F Q -Q H Y E D E E C
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;