3D Structure for MGV-GENOME-0361001_CDS_0142 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 96.59 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0361001_CDS_0142 1 AcrIE6 0.70 View Alignment MGV-GENOME-0361001_CDS_0142 M N E I V K S W L E G L I N K E I G D V L D D I Q S R K V W C L -G A ----S D K E A L Q I Q L D N L S L D N E Y L T (60)
MN LE I ++D++ R + +L L
AcrIE6 M N -N D T E V L E Q Q I K A F E -L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L I
MGV-GENOME-0361001_CDS_0142 -A L K K L K N R V -E ---R E -D -I (81)
+L
AcrIE6 E I L E E Q Y P G H A A D L S I K N L C P
MGV-GENOME-0361001_CDS_0142 2 AcrIE1 0.62 View Alignment MGV-GENOME-0361001_CDS_0142 M N ---E -I V K S ----W ---------L E G ----L I -N ----K E I G -D V L D D I Q S R K V W C L G (60)
M + + + + D ++
AcrIE1 M E K K L -S D A Q V A L V A A W R K Y P D L R E S L E E A A S I -L -S L I V F Q A -E T L S D Q A N E L A N Y I R R
MGV-GENOME-0361001_CDS_0142 A S D K E A L Q I Q L D N L S L D N E Y L T A L K ----K L K N R V E ----R E -D I (105)
+ E + N+ + + RV
AcrIE1 -Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I D R D V D
MGV-GENOME-0361001_CDS_0142 3 AcrIIC4 0.59 View Alignment MGV-GENOME-0361001_CDS_0142 M N E I V K S W L E -G ------------------L I N K E I G D V L D D I Q S R K V W C L G A -S D K E A L (60)
M S I +++ +S + + KE++
AcrIIC4 M K I -T S S N F A T I A T S E N F A K L S V L P K N H R E P I K G L F K S A V E Q F S S A R D F F K N E N Y S K E L A
MGV-GENOME-0361001_CDS_0142 Q I Q L -D N L S L D -N E Y -L T A L K K L K N R V E R -E --D I (95)
+ + NE + L K+ +E+
AcrIIC4 E K F N K E ---A -V N E -A V E K L Q K A I D L A E K Q G I Q -F
MGV-GENOME-0361001_CDS_0142 4 AcrIF25 0.56 View Alignment MGV-GENOME-0361001_CDS_0142 M N -E --I V K -S -------W L E G -------------------L I N ---K E ----I -G ----(60)
M + + G +
AcrIF25 M D N D D K K P D A L I H L R V P A E V K G R W V K E S R L E G M K L T D W I T G R V E A K A L S I A E V -L -E E A A
MGV-GENOME-0361001_CDS_0142 -------------------D V L -D D I Q S R K V W C L G A S -------D ----K E A L Q -I Q -L - (120)
D IQ+ + A+ +E +
AcrIF25 A M A R S L E D S P I F Y R N K L C A D G -I V T I Q Q Q A A R F S A A T D D A T R L D A A L W A R E G Y -Q L -L S S
MGV-GENOME-0361001_CDS_0142 ---D ------------------N L ----S L D -N E Y L T A L K K L K N R V E R E -D I (172)
D + + + +E
AcrIF25 G L P D S Y S G A V P N E G R T G W V T A S Q M A R L F G G -E A L W I E R C Q Q E L G G A G K E D G R
MGV-GENOME-0361001_CDS_0142 5 AcrIF2-IC2 0.54 View Alignment MGV-GENOME-0361001_CDS_0142 M N E I V ---K S -W -L E G L I N K E I G -------D V L ---D -D I Q --------S R -K V -W C L -G (60)
M + +
AcrIF2-IC2 M A T K T A Q M I A Q -Q H K -D T V A A C -E A A E A I A I A K D Q V W D G -E G Y T K Y T F D --D N S V -L I Q S
MGV-GENOME-0361001_CDS_0142 A --------S D K E A L Q I Q L D N L S L D N -E Y -L T A L K K L K N R V E R E D I (106)
D + + +D L + ++ + +L V E
AcrIF2-IC2 G T T Q Y A M D A D D A D S I K G Y A D W L D D E A R S A E A S E I E R L L E S V -E E -E
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;