3D Structure for MGV-GENOME-0360889_CDS_0050 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 85.17 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0360889_CDS_0050 1 AcrIE6 0.72 View Alignment MGV-GENOME-0360889_CDS_0050 M N D K D I W I L T L N F L F E R A T S L I H Q K D K Q V A K M V D P Y L L D -G T K E E L R N F I E -E -K -D G Q I (60)
M L L+ +
AcrIE6 M -N --N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D ----L -I -G ----
MGV-GENOME-0360889_CDS_0050 E E I C K L I N Y V Y K Y Q Y R K E N P F -D N -Y V P T M R D --V (95)
+ + + + +
AcrIE6 K Q L A S R R A E L I E I L E E Q Y P G -H A -A D L -S I K N L C P
MGV-GENOME-0360889_CDS_0050 2 AcrIE1 0.66 View Alignment MGV-GENOME-0360889_CDS_0050 M -N D K D ----I -W I -L -------T ----L ---N F ----L F E R A T S L I H Q K D K Q V A K M V D P (60)
M + L + A +L Q + +
AcrIE1 M E K K L S D A Q V -A -L V -A A W R K Y P D L R E S L E E A A S I L S L I V F Q A E T L S D Q A N E L A N Y -I --
MGV-GENOME-0360889_CDS_0050 Y L -L -D G T K E E L R N F I E E K D G Q I E E I C K L I N Y V Y K Y Q Y R K E N P F -D -N Y V P T -M R D -V (118)
EE+ D + V R RD
AcrIE1 --R -R -Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y ---G -D ----A I D R D V D
MGV-GENOME-0360889_CDS_0050 3 AcrIIC4 0.58 View Alignment MGV-GENOME-0360889_CDS_0050 M N -D K D I W -I -L ---------T ----L -N F -L F E R A T S L I H Q K -D K -Q V A -K M V D P Y L L D (60)
M + + + S++
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E -P I K G L F K S A V E -Q F S -S A -R D F F K N E N Y S K
MGV-GENOME-0360889_CDS_0050 G -T K E E L R N F I E E K D G Q I -E E I C -K L I N Y V Y K Y Q Y R K E N P F D N Y V P T M R D V (111)
+ + E+ ++ + + +
AcrIIC4 E L A E K F N K E -------A V N -E A V E -K L Q K A I D L -------A E ---K Q G I Q F
MGV-GENOME-0360889_CDS_0050 4 AcrIF3 0.57 View Alignment MGV-GENOME-0360889_CDS_0050 M N --D K D -I -W -I -L ----T L -------------------N -F L -F -E -R -A T S L I H Q K D (60)
M+ D + + A L
AcrIF3 M S S T I S D R -I -I -S -R S V I E A A R F I Q S W E D A D P D N L T E S Q V L -A A -S -S -F A A R L H E G L Q
MGV-GENOME-0360889_CDS_0050 K Q V A K M V D P Y L L D ---G -T K E -E -L -R N -F I ---E -E K ---D G Q I E -E -I C K L I N Y V Y K Y (120)
+V+ + + +++N
AcrIF3 A T V L Q R L V D E S N R D E Y R E F Q -A -W -E E -A L L N A D G R V T S N P F A D W -G -W W Y R I A N V M L A T
MGV-GENOME-0360889_CDS_0050 Q Y R -------K E --------N P F D N Y V -P -T M -R D --V (158)
F D
AcrIF3 A S Q N V G V A W G --S H V H G R L M A I F Q D R F Q -Q H -Y E D E E C
MGV-GENOME-0360889_CDS_0050 5 AcrIF23 0.57 View Alignment MGV-GENOME-0360889_CDS_0050 M N -D K D I W ---I ---L ----------------T L --------------------------(60)
M+
AcrIF23 M T N F Q T W L D S A D I P V -Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F
MGV-GENOME-0360889_CDS_0050 -----N ------F L F -E -R -A -T S L I H Q K D K Q V A K M V D P Y -L L D G T K E E L R N F I E E K D G Q (120)
+ + Q A M+ G ++ +IE + +
AcrIF23 G G R A L T G T A R Q K E W A E -K -I -R A E K V Q Q M N Q D Q A E M A --C D -P S G L L T A A K F W I E N R N D S
MGV-GENOME-0360889_CDS_0050 I E E I C K L I N Y V Y K Y ---Q Y R -K E ----N P F ----D -N Y -V -P -T M -R D --V (171)
+ EI + K
AcrIF23 A Q E I A G F V M Q Q K A L L A Q H R S A K A A G Q A D K -V A K I A A -E Y -N -A -L T A R W G F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;