3D Structure for MGV-GENOME-0359681_CDS_0088 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 89.55 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0359681_CDS_0088 1 AcrIE6 0.72 View Alignment MGV-GENOME-0359681_CDS_0088 M E N E M K S -I L D I I -A E I N K K D K K K -Q V F I L V N L I N Q L K S -T R -I -E A -N -S -N Y -E -D -C (60)
M +++ I K
AcrIE6 M N -N ---D -T E V L E -----Q ----Q --------I ---K -A F -E -L L -A -D -E -L K -D -R -
MGV-GENOME-0359681_CDS_0088 Q -L -S -Y A R -R T D -N -Y I -G N F K L I L F K K Q L D C L D M I ----I E N L D -S -Y -L D E -L -L -S (120)
+ + L KQL +E + +
AcrIE6 L P -T -L -E I L -S P M -Y T A V -M V T Y D L I G K Q L A S R R A E L I E I L E E Q Y P -G -H A A D L S I K N L
MGV-GENOME-0359681_CDS_0088 -K (122)
AcrIE6 C P
MGV-GENOME-0359681_CDS_0088 2 AcrIE1 0.67 View Alignment MGV-GENOME-0359681_CDS_0088 M E N E M K S I L D I I A E I N K K ---D K K -K Q V F I L V N L I N Q L K S T R I E A N S N Y E D C Q L S Y A R R T (60)
ME + +++ + +K + + ++++++ + + ++ + + R
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R -E S -L E E A A S I L S L I V F Q A E T L S D Q A N E L A N Y I R R Q -
MGV-GENOME-0359681_CDS_0088 D ---N Y I G N F K L I L F K -K Q L D C L D -M I I E -N L D S Y L D E L L -S --K (105)
+ + + + + +++
AcrIE1 G L E E A E G A C R N I D I M R A -K W V E V C G E V -N Q H G I R V Y G D A I D R D V D
MGV-GENOME-0359681_CDS_0088 3 AcrIIC4 0.60 View Alignment MGV-GENOME-0359681_CDS_0088 M E N E M K -S I L D I I A E -----I -N K K D K K K Q V F I L V N L I N Q L K S T R I E A N S N Y E D C Q -L S Y (60)
M + + I+ + K + L ++ + A
AcrIIC4 M K I T -S S N F A T I A T S E N F A K -L S V -L P K N H R E P I K G L F K S A V E Q F S S A R D F F K N E -N ---
MGV-GENOME-0359681_CDS_0088 A R R T D N Y I G N F K -L -I L F K K Q L D C L D M I I E N L D S Y L D E L L S -K (103)
K + + + + ++
AcrIIC4 -Y -----S K E L A E -K -F N K E A V N E A V E K L Q K A I D L A E K Q G I Q F
MGV-GENOME-0359681_CDS_0088 4 AcrIF23 0.57 View Alignment MGV-GENOME-0359681_CDS_0088 M E N E --M K -S -I ---L D I I A ---E I N K ----------------K ----------------(60)
M N + + ++
AcrIF23 M T N F Q T W L D -S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F
MGV-GENOME-0359681_CDS_0088 -------------D K -K K Q V F I L V N L I N Q L K S T R -I -E A N S N Y E D C Q L S -Y A R R T D N --- (120)
K V+ NQ + S R+D+
AcrIF23 G G R A L T G T A R Q K E W A E -K I R A E K V Q Q M N Q D Q A E M A -C D -P S G L L T A A K F W I E N R N D S A Q E
MGV-GENOME-0359681_CDS_0088 -Y I G N F K L I L F K K Q L D C L D -----M -I I E N L D S Y L D E L L S ---K (164)
+ Q + + + L
AcrIF23 I A G F V M Q Q K A L L A Q H R S A K A A G Q A -D K V A K I A A E Y N A L T A R W G F
MGV-GENOME-0359681_CDS_0088 5 AcrIC3 0.55 View Alignment MGV-GENOME-0359681_CDS_0088 M E N -E M K ---S -I ------L -D I -I ------A -E I N K K -D K K ------K Q V F I L V -----(60)
M + + K + +
AcrIC3 M S I Q V T S T N G R T V N L E I E L -G S -V V A S S G Q V -K F M A D K T -D R G L E S R F L V P E A G N R R I E V
MGV-GENOME-0359681_CDS_0088 -N L I N Q L K S T R I E A N S N Y E D C Q L -S -Y A -R R -T D N Y I G N F K L I L F K K Q L D C L D M I I E -N - (120)
AN + + +
AcrIC3 A L T ----G R D L E A A N A L F S ----E -L A -A -S V -------------E A T N E M Y R E L D -A -E
MGV-GENOME-0359681_CDS_0088 L D S Y L D E L L S K (131)
+ +L
AcrIC3 -R A Q I N K A L E G
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;