3D Structure for MGV-GENOME-0359099_CDS_0024 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 90.87 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0359099_CDS_0024 1 AcrIB1 0.83 View Alignment MGV-GENOME-0359099_CDS_0024 M E L R F E P K F Y R E H L G -E K -S -D -H K S L I Q D F Q P T --R P E G Y G L T R Y L Q D Q A F V D E E S G N I (60)
ME R L + F + L + A E S
AcrIB1 M E -S K N ---L R K L L N E Y E E -I -D I N E M L K N F R S I K N S G T K N D I E I F L H E K A I K F E K S S I S
MGV-GENOME-0359099_CDS_0024 R T Y L I R Q K G T G E L V G Y Y S I R A G N I L L R Q -K -E S --------------------T -N -V I S (120)
TY++ + E++GY +I ++++ S
AcrIB1 S T Y V V F S -E D N E I L G Y F T I A N R S L V I P K E N F G -I L S K T Q Q K K L G N S A A I L K N G -D -L M T S
MGV-GENOME-0359099_CDS_0024 G I E L T N F A V N G K Y R V R H P K V T M V G A R I F Y G F I M P Q I R E I R E T L G V K I L Y I F A L D Q V P L L N (180)
L + N G + F+ I+E + VK + + L++
AcrIB1 S F L L G Q L G K N Y S D --D -I E N L I T G R E L L T -F A Y D L F L K I K E L I N V K Y I W L E C Q N E P K L I S
MGV-GENOME-0359099_CDS_0024 Y Y K R L G F L S L Q K Q D E Q F V Y Q T C K P S Y D V T C I F M Y K -L L (218)
Y GF L + M L
AcrIB1 F Y Q N F G F K M L E S L -T ---S -----E -E G -L K V M I M E L K
MGV-GENOME-0359099_CDS_0024 2 AcrVA5 0.59 View Alignment MGV-GENOME-0359099_CDS_0024 M E L R F E P K F Y R E H L G E K -S D H -K S L I Q D F Q P T R P E G Y G L T R Y L Q D Q A F V D E E S G N I R T Y L (60)
M G
AcrVA5 M K -I E L ---S G ---G Y I C -Y S I --------E -----------------------------
MGV-GENOME-0359099_CDS_0024 I R Q K G T G E L V G Y Y S I R A G N I L L R Q K E S T N V I S G I E L T N F A V N G K Y R V R H P K V T M V G A R I F (120)
+ + V+ + I
AcrVA5 -------------E -----------------D E V T I D M V E V T -T K ------R Q G ----I G
MGV-GENOME-0359099_CDS_0024 Y G F -I M -P Q I R E I R E T L G V K I L Y I F A L --D ----Q V P L L N Y Y K R L G F L S L Q K Q D E Q F V Y Q (180)
++++ + + + A D Q L+ Y F
AcrVA5 S Q -L -I D -M V K D V A R E V -G L P I G L Y A Y P Q D D S I S Q E D L I E F Y F S N D F E Y D P D ----D ---
MGV-GENOME-0359099_CDS_0024 T C K P S Y -D V T C I F M Y K L L (198)
M
AcrVA5 --V ---D ---G R L M R -W S
MGV-GENOME-0359099_CDS_0024 3 AcrVIA1_Lse 0.38 View Alignment MGV-GENOME-0359099_CDS_0024 M E L -R F E P K F Y R E H L G E K S D H K S L I Q D F Q P T R P E G Y G L T R Y L Q D Q A -F -V -D E E S G N I R T (60)
M + K + + + L +
AcrVIA1_Lse M I Y Y I K D L K V ----------K G K I F E N L M ----N K E -A V E G L I T F L K -K -A -----E F E I
MGV-GENOME-0359099_CDS_0024 Y L I R Q K G T -G E L V G Y Y S -I R A G N I L L R Q K -E S T N V -I -S -G -I E ---L T N F A V N G K Y R V R (120)
+ + + S L +
AcrVIA1_Lse --Y S -R E N Y S K Y N K W F E M W K -S P -----T S -S L V F W -K -N -Y S F R C H L L F V I E K -D ----
MGV-GENOME-0359099_CDS_0024 H P K V T ----M -V ---G A R I F ----Y -G ----F I M P Q I R E I R E T L G V K I L Y I F A L D ----Q (180)
V + I + + + E L +
AcrVIA1_Lse -G E C -L G I P A S V F E S V L Q I Y L A D P F A -P D T K E L F V E V C N L Y E C L A D V T V V E H F E A E E S A W
MGV-GENOME-0359099_CDS_0024 V P L L -N Y Y -K R L G F -L S L Q K Q D E Q F V Y Q T C K P S Y D V T ---------C -------------(240)
L + D+ + P T
AcrVIA1_Lse H K L -T H N -E -T E V -S K R V Y S K D D D E L L K -Y I P E F L D T I A T N K K S Q K Y N Q I Q G K I Q E I N K E
MGV-GENOME-0359099_CDS_0024 --------------------------------I F M Y K L -L (280)
AcrVIA1_Lse I A T L Y E S S E D Y I F T E Y V S N L Y R E S A K L E Q H S K Q I L K E E L N
MGV-GENOME-0359099_CDS_0024 4 AcrIA3 0.37 View Alignment MGV-GENOME-0359099_CDS_0024 M E L R F E P K F Y R E H L G E K S D H K S L I Q D F -Q P T R P E G Y G L T R Y L Q D Q A F V D E E -S --G N I R T (60)
M +E LQ F E
AcrIA3 M S F Y I M Y I K V K E ----------M S E Q K Q -I --S L R S K Q K E L L Q -R F F E I A E V D E N -G D L C
MGV-GENOME-0359099_CDS_0024 Y L I R Q K G T G E -L -V -G -Y -Y S I R A G N I L L R Q K E S T N V I S G I E L T N F A V -N G K Y R V R H P K V (120)
+ + + + +
AcrIA3 I P L ----Y D -S -S -G -D -L T L F K -Q -------D -S R K Y Q M Y A Y F R I --L -R ---------
MGV-GENOME-0359099_CDS_0024 T M V G A R -I -F Y G -F I M P Q I R E I R E T L G V -K I L Y I -F A L D Q V P L L N Y Y K R L G F L -S -L -Q K (180)
I + +
AcrIA3 ------L -I -K K Q -----I F -------F I -----K -V ---K ------------K -V -K -R
MGV-GENOME-0359099_CDS_0024 Q D E Q F V Y Q T C K P S Y D V T C I F M Y K L L (205)
F+ + + +
AcrIA3 D -K K F L C -M -H S N V I D Q V K S V L E -S
MGV-GENOME-0359099_CDS_0024 5 AcrIA1 0.37 View Alignment MGV-GENOME-0359099_CDS_0024 M E L R -F E ---P K -F Y R E H -L G E K S D --------------H K S L -----------------(60)
M +
AcrIA1 M R S K M I K K E E K D N K I Y I T V -K -D E -E T G I E W T A V V E K V E F E W -C V K Q K E E L E V E D A E K S V
MGV-GENOME-0359099_CDS_0024 -----------I --------Q D F Q P T R P E ---G Y G L T R Y L Q D -Q A -F V D E E --------- (120)
I + L + L
AcrIA1 M L D Y A L F G N C A I P K V T A E E Y K N S L T -K Y T G E K M S R L L H I L Y N Y E -I V S Q N -D T K N I W V T E
MGV-GENOME-0359099_CDS_0024 ---S ---------------------------------------G -N -I R T Y L I -R -Q K G T (180)
+ R +
AcrIA1 L S R C L R R S Y L M R K E G K T K V G L N E A M K M H I G S G L H M R L Q S L L R K H G -F E T E V R V Q R K T A L G
MGV-GENOME-0359099_CDS_0024 G E L V G Y Y S -I R A G N I L L R Q K E S T N V I S G I E L T N F A V N G K Y R V R H P K V T -M V G A R I F Y G F I (240)
+VG I + + +
AcrIA1 F Q I V G R I D V Y D K ---E --------E N V -I Y E --L K Y T H N D K -L ---D -S V -R L N N Y L R Q -
MGV-GENOME-0359099_CDS_0024 M P Q I R E I R E T L G V K I L Y I -F A L D Q V P L L N ---Y Y K R L G F L S L Q K Q D E Q F V Y Q T C K P S --Y (300)
E + Y+ + + + +
AcrIA1 L N Y Y I E M A ---N A M K G Y L V I V H A D G S -V E E I K -R D -W --A --E ---T -D L E K -R A N -A F G
MGV-GENOME-0359099_CDS_0024 -----D V T -------------C ----I F M Y K L L (333)
F L
AcrIA1 I Y V E E N T L P P K K S R P D A E C I E -C P F Y N F C W G K L
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;