3D Structure for MGV-GENOME-0358433_CDS_0047 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 95.19 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0358433_CDS_0047 1 AcrIIA27 0.70 View Alignment MGV-GENOME-0358433_CDS_0047 M K K Y V V E I V --E -------K -I T -Y K V S I D A A S S E G A E N A V R R L Y D L G -A --L E N ---G E (60)
MK + + + ++A + A +R Y
AcrIIA27 M K T F N I I V S E S A N L K E H S S E L V D N I I Y K V E A K N R R E A F K K A R E E Y S F S S K W K F N M R D L T -
MGV-GENOME-0358433_CDS_0047 -L -E S V T F D -----V K E K E V V (81)
++ E +
AcrIIA27 A -I D N T H R R A W G R R Y L R V E E A
MGV-GENOME-0358433_CDS_0047 2 AcrIE2 0.65 View Alignment MGV-GENOME-0358433_CDS_0047 M K K Y V V E I V E K I -T --Y K -V -S I D -A A ----S -S -E G -A E N A V R R L Y D L ---G -A L --E N (60)
M Y+++ + + +D + A +++ +
AcrIE2 M N T Y L I D P R K N N D N S G E R F -T -V D A V -D I T A A A -K S -A A Q Q I L G E E F E G L V Y R E T G E S N G
MGV-GENOME-0358433_CDS_0047 G E -L E S V T ---F D V --K ---E K -------E V V (92)
++ + +
AcrIE2 S G M -F Q A Y H H L H G -T N R T E T T -V G Y P F H V M E L
MGV-GENOME-0358433_CDS_0047 3 AcrIA 0.59 View Alignment MGV-GENOME-0358433_CDS_0047 M K ----K Y -V --V E ---------I -V E K I T Y K -V S --I D --------A A -----------(60)
M K + ++
AcrIA M V E V K Q K T L S Y K L K I N T R D Y S I T -L E A -E L K A V I N V K G -N D L V Y E D K Q Q K F V G Y I E T I S S
MGV-GENOME-0358433_CDS_0047 -----S S -E G A E N A V R R L Y D L G A L E -N G -E L E -S -V T F -D V K E K E -V V (108)
E A+ ++ + A + T + +
AcrIA Y E T K N A -K E N A D E I L N E R F E K Y A N -G -L K -V L E -Q -T A E A I N A E I E I E
MGV-GENOME-0358433_CDS_0047 4 AcrIE8 0.59 View Alignment MGV-GENOME-0358433_CDS_0047 M K K Y V V E I V E K I T Y --K V S I D A A S S E G A E N A V R R L Y D L G A L E N G E --L E S -V T -F -D V -K (60)
M + + + V + + D
AcrIE8 M T T I T I N -T -Y D -P E A R F N M S G E E A K E F F A F V E E Q A K V S ---G F D V Y -Y -D S C T Y V D E E S
MGV-GENOME-0358433_CDS_0047 E ---K --E V --V (72)
E
AcrIE8 E R F V -E K C F Q N Y
MGV-GENOME-0358433_CDS_0047 5 AcrIC9 0.59 View Alignment MGV-GENOME-0358433_CDS_0047 M K ----K Y V V E I V E K I T Y K V S I D A A S S E G A E N A V R R L Y D L -G A ---L E ------N ----G (60)
M + + + ++ V
AcrIC9 M E T K M T S F Y K I T -A Y N S Q A L Y -F W G T D A D V D R Y V D -W L N R D R E I N V -Y A A E A I P -E A E W A
MGV-GENOME-0358433_CDS_0047 E -L E S -V -T F D V K E K E V -----------V (89)
E DV E +
AcrIC9 -Q Y E -G -R -D D V L S G E -E C G W D D F M S A E A
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;