3D Structure for MGV-GENOME-0352972_CDS_0010 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 89.77 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0352972_CDS_0010 1 AcrIE6 0.71 View Alignment MGV-GENOME-0352972_CDS_0010 M I K S I K R K F I K R I I D F Y D Y Q M L S L S M E M G Y N K K C S N Q E I K H M I D R V N E F N N I T N V L R ---(60)
M + + I + L + R
AcrIE6 M -N N -D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L -S P M Y T A V M V T Y D L I G K Q L A S R R A E L
MGV-GENOME-0352972_CDS_0010 -Y I L I D L ----E -N ---D --R -F (83)
IL +
AcrIE6 I E I L E E Q Y P G H A A D L S I -K N L C P
MGV-GENOME-0352972_CDS_0010 2 AcrIE1 0.62 View Alignment MGV-GENOME-0352972_CDS_0010 M -I -K S I K R K F I K ---------------------R -I -I -D -F -Y -D -Y -Q M L -S L S M E M (60)
M S + E
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E E A A S I L S -L -I -V -F -Q -A -E -T L -S D -Q A N E L
MGV-GENOME-0352972_CDS_0010 G Y -N K K C S N Q E I K H M I D R V N E F N N I T N V L R -Y ---I L ----I -D L -E -N -D R -F (114)
++ E+ + + D
AcrIE1 A N Y I R R Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y -G D -A -I -D R D V D
MGV-GENOME-0352972_CDS_0010 3 AcrIIC4 0.62 View Alignment MGV-GENOME-0352972_CDS_0010 M I -K S I -K R K ------F I K ---------------R I I D F Y D Y Q M L S L S M E M G Y N K K C S N Q (60)
M S + Q S+ S
AcrIIC4 M K I T S S N -F A T I A T S E N F -A K L S V L P K N H R E P I K G L F K S A V E Q F S S A R D F F K N -E N Y S K E
MGV-GENOME-0352972_CDS_0010 E I K H -M I D R V N E F N N I T N V L R Y I L I D L E N -D -R F (94)
+ + + N + L ++ +E F
AcrIIC4 L A E K F N K E ---A V N E A V E K L Q K A I D L A E K Q G I Q F
MGV-GENOME-0352972_CDS_0010 4 AcrIF23 0.54 View Alignment MGV-GENOME-0352972_CDS_0010 M -I K -S I ---K R K -------F I K -------------------------------------(60)
M + +I
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I -D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F
MGV-GENOME-0352972_CDS_0010 ----------------R I I D F Y D Y Q M L S L S M E M G Y N K K C S N Q E I K H M I D ----R ---V N E (120)
+I QM + + EM + +K I+ +
AcrIF23 G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A C D P S G L L T A A K F W I E N R N D S A Q E I A G
MGV-GENOME-0352972_CDS_0010 F N N I T N V -L R ----Y I L I ------------D -L -E -N D ---R -F (164)
F + + + + F
AcrIF23 F V M Q Q K A L -L A Q H R S A K A A G Q A D K V A K I A A -E -Y -N A L T A R W G F
MGV-GENOME-0352972_CDS_0010 5 AcrIF25 0.53 View Alignment MGV-GENOME-0352972_CDS_0010 M I -K --S ----I -K R -K -----F I K -------------------R I I D F Y D Y Q ----M -L (60)
M + ++ +
AcrIF25 M D N D D K K P D A L -I H -L -R V P A E V K -G R W V K E S R L E G M K L T D W I T G R V E A K A L S I A E V -L -
MGV-GENOME-0352972_CDS_0010 -S -L S -M E M ----G Y -N ----K K -------C S N Q E I K H M I D -R V ------N E F N N I T -N V (120)
+ M + + + Q + +
AcrIF25 E -E A -A A -M A R S L E -D S P I F Y R N K L C A D G I V T I Q Q Q A A R F S A -A T D D A T R L D A A L W A R E -
MGV-GENOME-0352972_CDS_0010 ----L R Y I L I ------------------------------------D -L ---E -N -D R F (179)
L L L D
AcrIF25 G Y Q L L S S G L P D S Y S G A V P N E G R T G W V T A S Q M A R L F G G E A L W I E R C Q Q E L G G A -G K E D G R
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;