3D Structure for MGV-GENOME-0352482_CDS_0084 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 94.17 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0352482_CDS_0084 1 AcrIE2 0.71 View Alignment MGV-GENOME-0352482_CDS_0084 M E R G K M K Y E I R Q I D A W S S G E S W T -W N E S Y K I G E F -K -T S -A A D H K R A F L N A L R K I G I V C K (60)
M Y I + GE A+D A +A+ I
AcrIE2 M --N --T Y L I D P R ---K N ---N D N -----S -G E R F -T -V D A V D I T A A A K S A A Q Q I L G E E F
MGV-GENOME-0352482_CDS_0084 R G K -C K V E --F --D ---G -D I Y E V Q -E ------R -K -S G L P M F A A I P I (108)
V G + G P F + +
AcrIE2 --E G -L V -Y R -E T G E S N G S G M F Q A Y H H L H G T N R T E T T V G Y P -F H V M E L
MGV-GENOME-0352482_CDS_0084 2 AcrIIA27 0.70 View Alignment MGV-GENOME-0352482_CDS_0084 M E R G K M K Y E -I R Q I D A -W S S G E S W T W N E S Y K I G E -F K T S A A -D H K -R -A F L N -A L R K I --(60)
M + I + A S ++ A + A
AcrIIA27 M -K ---T F N I I V S E S A N L K E H S S E -L V D N ----I I -Y K V E A K -N R R -E -A F K K A R E E Y S F
MGV-GENOME-0352482_CDS_0084 -G I V C K -R G K C K V E F -D G D I Y E V Q E R K S G -L -P M F A A I P I (100)
+ D + + +
AcrIIA27 S S K W K F N -M R D L T A -I D N T H R R A W G ----R -R -Y L R V E E A
MGV-GENOME-0352482_CDS_0084 3 AcrIF9 0.59 View Alignment MGV-GENOME-0352482_CDS_0084 M E R G K M K Y E I R Q I D A W S S G E S W T W N E S Y K I G E F K T S -A -A -D H K R A F L N A L R K I G I V C K R (60)
M Y I+ + N ++ K +
AcrIF9 M K ---A A Y I I K E V Q N --I ------N S E R E G T Q -I --E -A -T -S L S Q A K R I A S K E Q C F -H -
MGV-GENOME-0352482_CDS_0084 -G K C K V E F -D G D I Y E V Q E R K S G L P M F A A I P -I (92)
++E G E G ++
AcrIF9 G T V M R I E T V N G L W L A Y K E -D -G -K R W V -D -C Q
MGV-GENOME-0352482_CDS_0084 4 AcrIC9 0.56 View Alignment MGV-GENOME-0352482_CDS_0084 M E R G K M -K Y E I R Q I D A W S S G E S W T W N E S Y K I G E F -K T S A A D H K R A F L N A L R K I G I V -C K R (60)
ME Y I + + + Y + AD R L +
AcrIC9 M E T K M T S F Y K I T A Y ----N ----S -Q A L Y ---F -W -G T D A D V D R Y V D W -L N R ---D R -E I
MGV-GENOME-0352482_CDS_0084 -G -K C K V E F -D G D I Y E -V Q E ------R -K S G L P M F A A I P I (100)
+E G F + +
AcrIC9 N -V -Y A A E A I P E A E W A Q Y E G R D D V L S G E E C G W D D F M S A E A
MGV-GENOME-0352482_CDS_0084 5 AcrIF19 0.56 View Alignment MGV-GENOME-0352482_CDS_0084 M E R G K M K Y E I R Q I D A W S S G E S W T W N E S Y K I G E -F K ---T S A A -D H K R A F L N A L R K I G I V C (60)
M + S + L KI
AcrIF19 M K -P --L H T M -N Y ----------------D N N Q M S L V Y E S Y -D E Y G F E Y S V K L -K I S --V
MGV-GENOME-0352482_CDS_0084 K R -G K C K -V E F -D -G -D -I Y E V Q E -------R -----K S -------G ---L P -M -F A A I -(120)
R S F+A
AcrIF19 -R D -Y R -G -I -D -V -S -A F N A F P -E W E D T L R -M R D R V M S V E E I E N A M I S R Y K S -L F I A P P
MGV-GENOME-0352482_CDS_0084 P ------I (128)
I
AcrIF19 D C T Y E F D I
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;