3D Structure for MGV-GENOME-0352419_CDS_0100 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 94.64 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0352419_CDS_0100 1 AcrIE6 0.73 View Alignment MGV-GENOME-0352419_CDS_0100 M D K K Q T D K A K T I M R K A Y E V Y N E I D A L V G Q L R R E R ---A D Y E E -I D E L I T A R N T S C N V V D S (60)
M + + +D L L Y + + +
AcrIE6 M N -N D ---T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E
MGV-GENOME-0352419_CDS_0100 L Q Y I I E T -F ----D ---D -N -D -R (84)
L I+E
AcrIE6 L I E I L E E Q Y P G H A A D L S -I K N L C P
MGV-GENOME-0352419_CDS_0100 2 AcrIE1 0.69 View Alignment MGV-GENOME-0352419_CDS_0100 M D ---K K ------------------Q T D K A K T ----I -M -R K A Y E V Y N E I D A L V G Q L R R E (60)
M+ + + A + A + + L+ +RR
AcrIE1 M E K K L S -D A Q V A L V A A W R K Y P D L R E S L E E A A S I L S L -I -V F Q A E T L S D Q A N E L A N Y I R R -
MGV-GENOME-0352419_CDS_0100 R A D -Y E E ----I D -E L I T A R N T S C N V V D S L Q -Y I I E T -F ---D D N -D R (108)
EE + R V + D
AcrIE1 Q G -L -E E A E G A C -R N I D I M R A K W V E V C G E V -N Q H G I R V Y G D A I D R D V D
MGV-GENOME-0352419_CDS_0100 3 AcrIIC4 0.62 View Alignment MGV-GENOME-0352419_CDS_0100 M D K K --Q T D ------K -----------A K T I M R -K -A Y E V Y N E I D A L V G Q L R R E R A D Y E E (60)
M + + + + + + E E
AcrIIC4 M K I T S S N F A T I A T S E -N F A K L S V L P K N H R E P I K G -L F K S A V E Q F S S A R D F F K N E N Y S K E L
MGV-GENOME-0352419_CDS_0100 I -D E L I T A R N T S C -N V V D S L Q Y I I E T F D D N D R (92)
+ A N + + ++E +
AcrIIC4 A E K F N K E A V N E A V E -K L Q K A I D L A E K Q G I Q -F
MGV-GENOME-0352419_CDS_0100 4 AcrIC3 0.58 View Alignment MGV-GENOME-0352419_CDS_0100 M D K K ---Q T D ---K -------A K T I M R K A Y E V Y N E I D A L V G -Q L R -R -E ---R -------(60)
M ++ + + D +
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V V A S S G Q V K F M A D K T D R G L E S R F -L -V -P E A G N R R I E V A
MGV-GENOME-0352419_CDS_0100 ---A ----D Y E E I D E L I T A R N T S C N V V D S L Q Y I I E T F D D N -D R (103)
EL+ + L + +
AcrIC3 L T G R D L E A A N A L F S E L A A S V E A T N E M Y R E L D A E R A Q I N K A L E G
MGV-GENOME-0352419_CDS_0100 5 AcrIF3 0.56 View Alignment MGV-GENOME-0352419_CDS_0100 M D K K ----Q T D K A ----K T -------I ------------M -R -K -A Y E V Y N E I D A L V G Q L (60)
M + + A + + A V Q
AcrIF3 M S S T I S D R I I S R S V I E A A R F I Q S W E D A D P D N L T E S Q V L A A S -S -F A A R L H E G L Q A T V L Q R
MGV-GENOME-0352419_CDS_0100 R R E R A ---D Y E E I D E L -I T A R -------N ----T ------S -C -N -V ----V D -------(120)
+ +Y E + + +
AcrIF3 L V D E S N R D E Y R E F Q A W E E A L L N A D G R V T S N P F A D W G W W Y R I A -N -V -M L A T A S Q N V G V A W
MGV-GENOME-0352419_CDS_0100 --S L ----Q Y I I E T -F ---D D N -D -R (146)
+ I F + +
AcrIF3 G S H V H G R L M A I F Q D R F Q Q H Y E -D E E C
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;