3D Structure for MGV-GENOME-0348717_CDS_0012 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 95.14 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0348717_CDS_0012 1 AcrIE6 0.73 View Alignment MGV-GENOME-0348717_CDS_0012 M N K E A M K Q ----Y K K -L E A N L Q S L V S I N E W F K A R K ---D -----------A E A V E T Y N K L (60)
MN K E+ + L + + +
AcrIE6 M N N -D T E V L E Q Q I K -A F E L L A D E L K D R L P T L E I -L S P M Y T A V M V T Y D L I G -K Q L A S R R A E
MGV-GENOME-0348717_CDS_0012 I I -E -T -E -N -K -M -K I -L R ----A --T --F (91)
+I +
AcrIE6 L I E -I -L -E -E -Q -Y P -G H A A D L S -I K N L C P
MGV-GENOME-0348717_CDS_0012 2 AcrIIC4 0.62 View Alignment MGV-GENOME-0348717_CDS_0012 M N -K -E A M K Q ------Y ----K K -----------L E A N L Q -S L V -S I N E W F K A -R K ----(60)
M + L ++ S+ ++FK
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V -L P K N H R E P I K G L F K S A V E -Q F S S A R D F F K N E N Y S K E L
MGV-GENOME-0348717_CDS_0012 D A E A V E -T Y -N -K -L -I I -E T -E N K M K I L R A ---T F (96)
+ ++ +F
AcrIIC4 A E K F N K E -A V -N -E -A -V E K -L Q K A I D L A E K Q G I Q F
MGV-GENOME-0348717_CDS_0012 3 AcrIF23 0.59 View Alignment MGV-GENOME-0348717_CDS_0012 M N -K -E A M K ---Q ----Y K K ---------------------------L E -----------(60)
M+
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R -G I D A R A V A K T F
MGV-GENOME-0348717_CDS_0012 ---------A -------N -------------------L -Q -S L V S I N E W F K A R --K ---- (120)
L+++ ++
AcrIF23 G G R A L T G T A R Q K E W A E K -I R A E K V Q Q M N Q D Q A E M A C D -P -S G L L T A A K F W I E N R N D S A Q E
MGV-GENOME-0348717_CDS_0012 D ----------A E A V E ----T -Y -N -K L I I E T E N K M K I L R A T --F (165)
+ ++ +L A F
AcrIF23 I A G F V M Q Q K A L L A Q H R S A K A A G -Q -A D K V A K I A A E Y N A L T A R W G F
MGV-GENOME-0348717_CDS_0012 4 AcrIE1 0.59 View Alignment MGV-GENOME-0348717_CDS_0012 M N ---K E ---A M -K -Q ---Y ----K K --------L -E A -N -------L Q -S -L V S -I N -E (60)
M + A Y L+ ++ +
AcrIE1 M E K K L S D A Q V A L V -A A W R K Y P D L R E -S L E E A A S I -L -S L -I V F Q A E T L S D -Q -A N E L -A N
MGV-GENOME-0348717_CDS_0012 W F K A R K D A E ----A V -E ----T Y N K L I I E T E ----N -K -M K I L -R A T ------F (114)
R +E + +E +
AcrIE1 Y -I R R Q G L E E A E G -A C -R N I D I M R A K W V E V C G E V N -Q -H G I R V Y G D -A I D R D V D
MGV-GENOME-0348717_CDS_0012 5 AcrIIA28 0.52 View Alignment MGV-GENOME-0348717_CDS_0012 M N ----K -E -A -M K -Q Y K K --------L E A N L Q S L V -S I N -E W F K -A R K --------D --(60)
M K L + + + +
AcrIIA28 M K T I F T K K -Q -T E -E L L N D I S I E K Q K E L F N S M H D F R S Q -H A K E A -R I P G W S D K Y N K L E K K
MGV-GENOME-0348717_CDS_0012 --A -E -A V E -T -Y -N -K L I I E T -E N K -M --K I L R -A T ---F (101)
E E+ L
AcrIIA28 M L -S -D -F E E -V -T -G I K Y D T -L E S -E L I W D N L S N K F L Y N S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;