3D Structure for MGV-GENOME-0347609_CDS_0106 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 95.18 ;
Download
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0347609_CDS_0106 1 AcrIE6 0.73 View Alignment MGV-GENOME-0347609_CDS_0106 M S N E E K I N E L K K L Q S -R -L Y T E D N E L F E K I M K L E D F I N S I R I T K -I -S K Q Q A N L L E V Q F Q (60)
M+ L + L D + ++ +++ V+
AcrIE6 M N --N D T E V L E ----Q -Q ----I K A F E L L A D E L K D R L P T L ---E I -L -S P M Y T A V M V T Y D
MGV-GENOME-0347609_CDS_0106 A M R T Y H Q V L R A R I N D L Q -N K I ----F --E G -E N K -I C (97)
+ RA + ++ N
AcrIE6 L I G K Q L A S R R A E L I E I L E E Q Y P G H A -A D L S I K N -L C P
MGV-GENOME-0347609_CDS_0106 2 AcrIE1 0.69 View Alignment MGV-GENOME-0347609_CDS_0106 M -S -N E ---E K I ----N --------E -L -K -K -L Q S R L Y T E D N E L F E -K I -M K L E -D F I N (60)
M + + S L + E + +N
AcrIE1 M E K K L S D A Q V A L V A A W -R K Y P D L R E -S -L -E -E A A S I L S L I V F Q A -E T L -S D Q -A N E L A N
MGV-GENOME-0347609_CDS_0106 S I R I T K I S K Q Q A N L L E V Q F Q A M R T Y H Q V L R A R I N D L Q N K -I F E G E N K I -C (110)
IR + A + + +MR + +N + + +
AcrIE1 Y I R R Q --G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I D R D V D
MGV-GENOME-0347609_CDS_0106 3 AcrIIC4 0.60 View Alignment MGV-GENOME-0347609_CDS_0106 M -S N E E K I N -E --L ----K K ----L Q S R L Y T E D N E L F E K I M -K L E -D F I N S I R I T K I S K Q (60)
M + L LF + +
AcrIIC4 M K I T S S N F A T I A T -S E N F -A K L S V L P K N H R E P I K G L F K S A V E -Q F S S A R D F F K N E N ---Y
MGV-GENOME-0347609_CDS_0106 Q A N -L L E V Q F Q -A M R T Y H Q V L -R -A R I -N D L Q N K I F E G E N K ---I C (106)
+ L+E + LQ I E
AcrIIC4 S K -E L A E K F N K E -------A -V -N E A -V E K L Q K A I D L A E K Q G I Q -F
MGV-GENOME-0347609_CDS_0106 4 AcrIC3 0.58 View Alignment MGV-GENOME-0347609_CDS_0106 M S N E -E -----------K -I N E L K ---K L Q S R L Y T E D N E -L F E K I M K L E -D F I N S I R I T K (60)
MS + E + N
AcrIC3 M S I Q V T S T N G R T V N L E I E L -G S V V A S S G Q V K F M A D K T D R G -L E S R F L V P E A -G N R R I E V A
MGV-GENOME-0347609_CDS_0106 I S K Q Q A N L L E V Q F Q A M R T Y H Q V L R A R I N D L Q N K I F E G E N K I -C (103)
++ + ++ + F+ + +L +
AcrIC3 L T G R D L E A A N A L F S E L A A S V E A T N E M Y R E L D A E R A Q I N K A L E G
MGV-GENOME-0347609_CDS_0106 5 AcrIF23 0.57 View Alignment MGV-GENOME-0347609_CDS_0106 M -S N E E ---K I N E ----L K -K ---------------------------------------(60)
M + +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N -G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F
MGV-GENOME-0347609_CDS_0106 -------------L Q S R L Y T E D ----N E L F E K I -M -K L E D -F I N -S I R -I T K I ----S K Q (120)
++ E N + + S Q
AcrIF23 G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A -C D -P S G L L -T A A -K F W I E N R N D S A Q
MGV-GENOME-0347609_CDS_0106 Q A N L L E V Q F Q A M R T Y H Q V L R -----A -R I -N D L Q N K I F E G E N K I -C (166)
+ Q A H ++ + + +
AcrIF23 E I A G F V M Q Q K A L L A Q H R S A K A A G Q A -D K -V A K I A A E Y N A L T A R W G F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;