3D Structure for MGV-GENOME-0346556_CDS_0116 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 92.69 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0346556_CDS_0116 1 AcrIE1 0.71 View Alignment MGV-GENOME-0346556_CDS_0116 M N --D -N A N V --N ----V ---S -D -K --------------K -D -K ----E I E D L K K H L S -(60)
M A+V + +L +
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R -E -S L E E A A S I L S L I V F Q A -E -T L S D Q A N E L A N Y I R R
MGV-GENOME-0346556_CDS_0116 A A N A -S W T -K Y F K E C E T L K Q E L L R Y K E L V ----K -V -Q -S A I I N -N -N (108)
+ + + + V +I
AcrIE1 Q G L -E E A -E G A C R N I D I M R A K W V E V C G E V N Q H G I R -V -Y G D A I D R D V D
MGV-GENOME-0346556_CDS_0116 2 AcrIC3 0.58 View Alignment MGV-GENOME-0346556_CDS_0116 M N D N A N V --N -----------V ----------S D K K ---D K ----E I E --------D -L K (60)
M+ +++ V DK E
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V V A S S G Q V K F M A D K T D R G L E S R F L V P E A G N R R I E V A L T -
MGV-GENOME-0346556_CDS_0116 -K -H L S A A N A S W T K Y F K E C E T L K Q E L L R Y K E L V K V Q S A I I N N N (103)
L AANA ++ E + ++
AcrIC3 G -R D L E A A N A L F S E L A A S V E A T N E M Y R E L D A E R A Q I N K A L E -G
MGV-GENOME-0346556_CDS_0116 3 AcrIE6 0.57 View Alignment MGV-GENOME-0346556_CDS_0116 M N D N A N V N ---V S D K ---K -D -K -E -I -E -D -L -K K -------H L -S -A A N A S W T K Y F K E (60)
MN + A+ ++ K
AcrIE6 M N N -D T E V L E Q Q I K A F E L L A -D -E -L -K -D -R -L -P T L E I L S P M -Y -T A V M V T Y D L I G K Q
MGV-GENOME-0346556_CDS_0116 C E T L K Q E L L R -Y K E L V K V Q -S A I -I -N --N -N (92)
+ + EL+ E +
AcrIE6 L A S R R A E L I E I L E E Q Y P G H A A D L S -I K N L -C P
MGV-GENOME-0346556_CDS_0116 4 AcrIF23 0.51 View Alignment MGV-GENOME-0346556_CDS_0116 M N D --N ----A N --V --------N -----------------------V -----------S (60)
M+ + A
AcrIF23 M T N F Q T W L D S A D I P -V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F
MGV-GENOME-0346556_CDS_0116 -----D K -----------K ----D K -------E -I -E D -L K K H -L S -A A N A -S W T ----- (120)
E A
AcrIF23 G G R A L T -G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M -A -C D -P S G L -L T A -A K F W I E N R N D S
MGV-GENOME-0346556_CDS_0116 -----K Y F K E C E T L K Q E L L --------R Y K E -L V -K -V -Q -S A I I N N --N (170)
L + +A+
AcrIF23 A Q E I A G F V M Q Q K A L L A Q H R S A K A A G Q A D K V A K I -A -A -E -Y N A L T A R W G F
MGV-GENOME-0346556_CDS_0116 5 AcrIB9 0.51 View Alignment MGV-GENOME-0346556_CDS_0116 M N D N A N V --N -V -------S D K K D K E I E D -L K K ---------------------------(60)
MN A + +K ++ LK
AcrIB9 M N K F A F E N D K Y L E R N I K A V V E K I A R D F N L H L K -S K Y S K D C E F T V V A D N S F D N I E N S T I F L
MGV-GENOME-0346556_CDS_0116 ---------------------------------------------H L ------------- (120)
+
AcrIB9 E I K R N D G K A C Q D H H I Y A E Y E C D E D D N E Y I A L T V K F Y G S S A S N Q I N T V Q G I K S S K Y A S C I V
MGV-GENOME-0346556_CDS_0116 S --------A A N A --------S W T K Y ----F K E C E T L K Q E L -----L -R Y -K -E ----L V (180)
+ E KQ + L
AcrIB9 -S D T D N Q L S K S I H E L N L K K E K E Q Q E A W N K K E A E Y A R K K Q A Y V S Q S Q R E K -Y -E -D I F D L P
MGV-GENOME-0346556_CDS_0116 K ---V Q -S -A I -I -N N N (197)
AcrIB9 F D F Y D Y I -D K K E -Q G L I
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;