3D Structure for MGV-GENOME-0346556_CDS_0114 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 83.65 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0346556_CDS_0114 1 AcrIE1 0.73 View Alignment MGV-GENOME-0346556_CDS_0114 M K -K L K A I L S G A N F I D R L F D L R E R D V K R S L E S A S D D A E R Q M T E A E I R Y -E E L C K -K L G E K (60)
M KL + + D++ SLE A + + +
AcrIE1 M E K K L ---S D A Q V A L V A -A W R K Y P D L R E S L E E A A S I L S L I V F -Q A E T L S D -Q A N E L A N Y I
MGV-GENOME-0346556_CDS_0114 E V N Y T T T I N -Q M L E Q K D I I R R A K E T I E A V K A I K D D L E S -E V E -L K E E D K K K K (112)
+ + + E V + + + D
AcrIE1 R R Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I -D -R --D -V -D
MGV-GENOME-0346556_CDS_0114 2 AcrIE6 0.67 View Alignment MGV-GENOME-0346556_CDS_0114 M K K L K A I L S -G -A N F I D R L F D L R E R D V K R S L E S -A S D D A E -R Q M T E A -E -I -R Y E -E L C K (60)
M + L
AcrIE6 M N N D ---T E V -L E --------Q -----------Q -----I K -A F E L L A -D -E -L K D R L P -
MGV-GENOME-0346556_CDS_0114 -K L G E K E V N Y T T T I N Q M L E Q K D I I R R A K E T I E -A V K -A I K D D L E S E V E L K E E D K K -K -K (119)
YT + + + + + ++
AcrIE6 T L -E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L I E I -L E E Q Y P G H A A D L --S I K N --L -C P
MGV-GENOME-0346556_CDS_0114 3 AcrIC3 0.61 View Alignment MGV-GENOME-0346556_CDS_0114 M K K L K A --I L S G A N F I -D R L F D -------L R E R -D V K R S L E S A S D D A E -R Q M T E -A E I --(60)
M + + G L VK ++ +E R E+
AcrIC3 M S -I Q V T S T N -G -R -T V -N L E I E L G S V V A -S S -G Q V K F M A D K T D R G L E S R F -L V P -E A G N
MGV-GENOME-0346556_CDS_0114 --R Y -E -E L C K K L G E K -E V -N Y T T T I N Q M L E Q K D -I -I -R -R A -K E -T I E -A V -K -A -I - (120)
L T
AcrIC3 R R I -E -V A L -------T G -R D L E A A N A L F S ----E -L -A -A S -V E -A T N -E M -Y -R -E -L
MGV-GENOME-0346556_CDS_0114 K -D -D -L -E -S -E -V E L K E E D K K K K (145)
+
AcrIC3 -D -A -E -R -A -Q -I N K A L ----E -G
MGV-GENOME-0346556_CDS_0114 4 AcrIF23 0.58 View Alignment MGV-GENOME-0346556_CDS_0114 M K K L K A I L S --------G A N F I D R L F D -------------------------------L -(60)
M L ++ID
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T -G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F
MGV-GENOME-0346556_CDS_0114 ---R E -R --------D V K R S L E S A S D D A E R Q M T E A E I R Y E E L C K K L G E K E V N Y T T T I N Q M (120)
+ + E L + N + +++
AcrIF23 G G R A -L -T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A C D P S G L L T A A K F W I E N R N D S A Q E I
MGV-GENOME-0346556_CDS_0114 L E Q K D I I R R A K E T I E A V K -A I K D D -L -E -S -E -V E L K E E D K K K --K (166)
+ + + + +K A D + +
AcrIF23 A G F V M Q Q K A L L A Q H R S A K A A G Q A D K -V -A -K -I A A E Y N A L T A R W G F
MGV-GENOME-0346556_CDS_0114 5 AcrIIC4 0.55 View Alignment MGV-GENOME-0346556_CDS_0114 M K K L K A I L S G A N F I D R L F D L R E R D V K R S L E S -A S D D A E R -Q M T -E A E I -R -Y E E L C K K L G (60)
MK + + S + + E +
AcrIIC4 M K I T S S N F -----A -T I A ---T --------S E N ----F A K -L S V -L P K N -H R E P I K G L F K
MGV-GENOME-0346556_CDS_0114 E K E V N Y T T T I N Q M L E Q K D I I R -----R A K E -T I E A V K A I K D D L E S E V E L K E E D K K K K (117)
+ ++ + + EAV + + L ++L E
AcrIIC4 S A V E Q F S S A R D F F K N E N Y -S K E L A E K ----F N K E A V N E A V E K L Q K A I D L A E K Q G I Q F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;