3D Structure for MGV-GENOME-0345317_CDS_0086 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 83.23 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0345317_CDS_0086 1 AcrIF9 0.73 View Alignment MGV-GENOME-0345317_CDS_0086 M -L F -Q -I V E E L D N Y K --S -N T -F -L V D C K S L A S A K R F A S R L C A G R L T P L Y I Y K G D -D I V (60)
M + I E ++ SL +AKR AS+ + T I +
AcrIF9 M K A A Y -I I K E V Q N I N S E R -E G -T -Q -I E A T S L S Q A K R I A S K E Q C F H G T V M R I E T V N G L W L
MGV-GENOME-0345317_CDS_0086 A Y R E W F S S K W K N -C (74)
AY+E +W
AcrIF9 A Y K E -D G K R W V D C Q
MGV-GENOME-0345317_CDS_0086 2 AcrIIA27 0.60 View Alignment MGV-GENOME-0345317_CDS_0086 M -L F Q I V E -E -L D --N ---Y -K S -N T F -L V D --C K S L A S A K R F A S R L C A G -R -----L -T (60)
M F+I+ E + + K+ A + A
AcrIIA27 M K T F N I I V S E S A N L K E H S S E L -V D -N I I -Y K V E A K N R R E A F K K A R E E Y S F S S K W K F N M R -
MGV-GENOME-0345317_CDS_0086 P L Y I Y K -G D D I V A Y R E W F S --S K W K N C (87)
L + + +
AcrIIA27 D L T A I D N T H R R A W G ----R R Y L R V E E A
MGV-GENOME-0345317_CDS_0086 3 AcrIF5 0.56 View Alignment MGV-GENOME-0345317_CDS_0086 M -L --F Q I -V -E E L D N Y K S N T F ---------L V D C ---K S L A S A K R F A S R L C -A G R L T P L (60)
M E N S + A A
AcrIF5 M S R P T V V T V -T E T P R N P G S Y E V N V E R D G K M V V G R A R A G S D P G A A A A K A M Q M A M E W G S P N Y
MGV-GENOME-0345317_CDS_0086 Y I Y K G D D I V A Y R E W F S S K W -K N C (83)
I ++A
AcrIF5 V I L G S N K V L A F I P E Q ---L R V K M
MGV-GENOME-0345317_CDS_0086 4 AcrIE2 0.56 View Alignment MGV-GENOME-0345317_CDS_0086 M L F Q I V E E -L D N -Y K S -N T F L V D C K S L A S A K R F A S R L C A G R L T P L Y I Y K G D -----D I V A (60)
M +++ N + A AK A+ + L
AcrIE2 M N T Y L I D P R K N N D N S G E R F T V D A V D I T A A A K S A A Q Q I L G E E F E G L V Y R E T G E S N G S G M F Q
MGV-GENOME-0345317_CDS_0086 Y R -E -W -F --S ----S K ---W ---K N C (87)
AcrIE2 A Y H H L H G T N R -T E T T V -G Y P -F H V M E L
MGV-GENOME-0345317_CDS_0086 5 AcrIC9 0.56 View Alignment MGV-GENOME-0345317_CDS_0086 M --L ---F Q I V -E E L D N Y K S N T F L V D C K S L A S A K R F A S R L C A G R -L T P L Y I Y K G D -D I --(60)
M F + N + L + A + R + L R ++ +
AcrIC9 M E T K M T S F Y K I T -A Y -N -S Q --A L Y F W G T D A D V D R Y V D W L N R D R E I N V Y A A E A I P E A E W A
MGV-GENOME-0345317_CDS_0086 -V -A Y R -E W ------F -S --S K W K --N C (88)
R + +
AcrIC9 Q Y E G -R D D V L S G E E C -G -W D -D F M S A E A
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;