3D Structure for MGV-GENOME-0344206_CDS_0010 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 82.36 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0344206_CDS_0010 1 AcrIE6 0.71 View Alignment MGV-GENOME-0344206_CDS_0010 M L L I L I N V I V R -K -H F T K I E V I K M T E K D K R -V L K Y A I D N L I A R E N N L C E G S C K S N P T -H R (60)
M + ++D L R +L E +
AcrIE6 M N N D T E V ----L -E -Q Q -------I K ----A -F E L L A D E L K D R L P T L -E ---I L S -P M -Y
MGV-GENOME-0344206_CDS_0010 A E R E R D R D L I I F G I R D V L C E V E R L E E Q E -K E -M -L E -K -V -K -H E V V R -F -D (112)
DLI + E+ + E + +
AcrIE6 T A V M V T Y D L I G K Q L A S R R A E L I E I L E E Q Y P -G -H A -A D L -S -I K -N --L -C P
MGV-GENOME-0344206_CDS_0010 2 AcrIE1 0.63 View Alignment MGV-GENOME-0344206_CDS_0010 M L L I L ---I N -V I --V -R -K H F T K I E V I K M T E K D K R V L K Y A I D N L I A R E N N L C E G S C K S N (60)
M L + + K E + ++ +++L N L +
AcrIE1 M E K K L S D A Q -V -A L V A A W R K Y P D L R E S L E E A A S I L S L I V F Q A E T L S D Q A N E L A N Y I R R --
MGV-GENOME-0344206_CDS_0010 P T H R A -E R E R D R D L I I F G I R D V L C E V E R L E E Q E K E M L -E K V K H -E V -V R F -D (112)
+ + + I + +V + R D
AcrIE1 -----Q -G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I -R V Y G D -A I D R D V D
MGV-GENOME-0344206_CDS_0010 3 AcrIIC4 0.60 View Alignment MGV-GENOME-0344206_CDS_0010 M L L I L I N -V I V R -K --H F T K I E V -I -K -M ----T E K D K -R -V L -K Y -A -I D -N L I A -R E N (60)
M + + + L
AcrIIC4 M K I T S S -N F A -T I A T S E N -F A K -L -S -V -L P K N H R E P I K -G -L F -K S -A -V E -Q F S S -A R
MGV-GENOME-0344206_CDS_0010 N L C E G S C K S N P T H R A E R E R D R D L I I F G I R -D V L C E V E R L E E Q E K E M L E -K V K H E V V R F D (119)
++L+ + V + E + + +
AcrIIC4 D F F K N E N ----Y -------S K E L A E K F N K E ----A V N E A V E K L Q K A -I D L A E K Q G I Q -F
MGV-GENOME-0344206_CDS_0010 4 AcrIC3 0.52 View Alignment MGV-GENOME-0344206_CDS_0010 M L L I L I N V I V R K H F T K I E V I K M T E K D K R ---V L K Y A I D N -L I A R E N N L C E G S -C K S N -P T (60)
M + + + R IE+ D + + E +
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V V A S S -G Q V K F M A D K T D R G -L E S R F L V P E A G N R R I E V A L
MGV-GENOME-0344206_CDS_0010 H R A E R E R D -R D L I I F G I R D V L C E V E R L E E Q E K E M L E K V K H E V V R F D (106)
+ E ++ + + + + +
AcrIC3 T G R D L E -A A N -A L F S E L A A S V E A T N E M Y R E L D A E R A Q I N K A L -E -G
MGV-GENOME-0344206_CDS_0010 5 AcrIF2-IC2 0.51 View Alignment MGV-GENOME-0344206_CDS_0010 M L -L I L I N V I V R K H F T K I E V ---I K -M T E K D K R ---V L K -Y A I D N L I -A -R E N N L C E G S C (60)
M+ + ++ ++ + + + K + + S
AcrIF2-IC2 M A T K T A Q M I A Q Q H K -D T V A A C E A A -E A I A I A K D Q V W D --G E G -Y T K Y T -F ----D -D N S V
MGV-GENOME-0344206_CDS_0010 K --S -N -P T H R A E R E R D R D L I I F G I R D V L -C E -V -E -R -L -E E Q E K E M L E K V K H E V V R F D (120)
+ T A + I+ + E +E++ V +
AcrIF2-IC2 -L I Q S -G T T Q Y A M D A D ----D A D S I K G Y A D -W L -D -D -E -A R S A E A S E I E R L L E S V E E -E
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;