3D Structure for MGV-GENOME-0344206_CDS_0001 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 96.68 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0344206_CDS_0001 1 AcrIE6 0.73 View Alignment MGV-GENOME-0344206_CDS_0001 M N D V K ----K I I I A L -K D E Y S Y C Q D I A Y T A Q K E G -------D E E R M T W Y Y G K A T G I K K S -(60)
MN I A D + T+ + +
AcrIE6 M N N D T E V L E Q Q I K A -F E L L A D E L K D R L P T L -E I -L S P M Y T A V M V T Y D L I G K Q L A S R R A E L
MGV-GENOME-0344206_CDS_0001 I E -T -I E K ---M -K -N Y ---G -I -I (85)
I +E +
AcrIE6 I -E -I L E E Q Y P G H -A A D L S I K N L C P
MGV-GENOME-0344206_CDS_0001 2 AcrIE1 0.60 View Alignment MGV-GENOME-0344206_CDS_0001 M -N ---D V K K I I I --------------A L ----K ----D ----E Y S -Y -C Q D I A Y -T A Q K (60)
M D+ +++ + S + +
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E E A A S I L -S L I V F Q A E T -L S D -Q -A N E L A N Y -I R
MGV-GENOME-0344206_CDS_0001 E G D E E R M T W Y Y G K A T G I K K S I E T I E -K M K N Y ----------G -I -I (106)
E + + + +
AcrIE1 R Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I D R D -V D
MGV-GENOME-0344206_CDS_0001 3 AcrIIC4 0.57 View Alignment MGV-GENOME-0344206_CDS_0001 M N D V K ---K I I I --------------------A L K D E Y S -Y C Q D I A Y T A Q -K -E G D E E R M (60)
M I+ L A E
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E P I K G L F K S A V E -Q F S S A R D F F K N E N Y S K E L A
MGV-GENOME-0344206_CDS_0001 T -W Y Y -G K A T G I K K S I E T I E K M K N Y -G I -I (90)
+ ++ + + + GI
AcrIIC4 E K F N K E -A V N E A V E K L Q K A I D L A E K Q G I Q F
MGV-GENOME-0344206_CDS_0001 4 AcrIF25 0.56 View Alignment MGV-GENOME-0344206_CDS_0001 M N -D V K ----K I ----I I --------------------------A L K D ----E Y S Y C Q D I (60)
M D K I + A
AcrIF25 M D N D D K K P D A L I H L R V P A E V K G R W V K E S R L E G M K L T D W I T G R V E A K A L S I A E V L E E A A A M
MGV-GENOME-0344206_CDS_0001 A Y T A Q K E -G ---------------------------------------------------(120)
A ++
AcrIF25 A R S L E --D S P I F Y R N K L C A D G I V T I Q Q Q A A R F S A A T D D A T R L D A A L W A R E G Y Q L L S S G L P
MGV-GENOME-0344206_CDS_0001 ----------------D E E R M T W Y Y G K A T -G I K K S I E T I E K M K N Y -G I I (169)
M G I + +
AcrIF25 D S Y S G A V P N E G R T G W V T A S Q M A R L F G G E A L W I E R C Q Q E L G G A G -K E D G R
MGV-GENOME-0344206_CDS_0001 5 AcrIF23 0.55 View Alignment MGV-GENOME-0344206_CDS_0001 M N D V K ----K -I -I I ---------------------------------------------(60)
M+ I
AcrIF23 M T N F Q T W L D -S -A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T
MGV-GENOME-0344206_CDS_0001 -----------------A L --------K ----D E Y ----S Y C Q -D I A Y -T A Q K -E G ---- (120)
+ E S +A
AcrIF23 F G G R A L T G T A R Q K E W A E K I R A E K V Q Q M -N Q D Q A E M A C D P S G L -L T A A -K F W I -E --N R N D
MGV-GENOME-0344206_CDS_0001 D E E R M T W Y Y G K A T G I K K S I E ------------T I E K M K N Y -G I ---I (167)
+ + I N +
AcrIF23 S A Q E I A G F V M Q Q K A L L A Q H R S A K A A G Q A D K V A K I A A E Y N A L T A R W G F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;