3D Structure for MGV-GENOME-0343292_CDS_0091 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 91.80 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0343292_CDS_0091 1 AcrIIA26 1.00 View Alignment MGV-GENOME-0343292_CDS_0091 M K K L Y I Q T N Q F A N G E L Q V E N T S Y E L C D T F K E L Y S V A S N L V D E N T L N F V E D N F I E Q N Y K D E (60)
MKKLYIQTNQFANGELQVENTSYELCDTFKELYSVASNLVDENTLNFVEDNFIEQNYKDE
AcrIIA26 M K K L Y I Q T N Q F A N G E L Q V E N T S Y E L C D T F K E L Y S V A S N L V D E N T L N F V E D N F I E Q N Y K D E
MGV-GENOME-0343292_CDS_0091 Y N G V Y E N D G D T G E F V G Q V F E N K V T E E Q F K E L L E Q L E I T Y T E F D P E E E L A K C I A N K N R K S E (120)
YNGVYENDGDTGEFVGQVFENKVTEEQFKELLEQLEITYTEFDPEEELAKCIANKNRKSE
AcrIIA26 Y N G V Y E N D G D T G E F V G Q V F E N K V T E E Q F K E L L E Q L E I T Y T E F D P E E E L A K C I A N K N R K S E
MGV-GENOME-0343292_CDS_0091 F Y G N G L K V I A E Y L E S I S H E D A L A V V T Y Y Y F Y F G F G Y E D Q L I S D I K D D Q E D G V K F E H V E R S (180)
FYGNGLKVIAEYLESISHEDALAVVTYYYFYFGFGYEDQLISDIKDDQEDGVKFEHVERS
AcrIIA26 F Y G N G L K V I A E Y L E S I S H E D A L A V V T Y Y Y F Y F G F G Y E D Q L I S D I K D D Q E D G V K F E H V E R S
MGV-GENOME-0343292_CDS_0091 E T I (183)
ETI
AcrIIA26 E T I
MGV-GENOME-0343292_CDS_0091 2 AcrIIA33 0.60 View Alignment MGV-GENOME-0343292_CDS_0091 M K K L Y I Q T N Q F A N G E L Q V E N T S Y -E L C D T F K E L Y S V A S N L V D E N T L N F V E D N F I E Q N Y K D (60)
M K + +T Y ++ +LVD + D
AcrIIA33 M I K W T -G K -S T D -K G W ----I R T V -E A E T ---Y Y K L L E T L V D K G ---Y I G D Y I D S -D S -Q
MGV-GENOME-0343292_CDS_0091 E Y N G V Y E N D G -D T -G E F V G Q V F E N K V T E E Q F K E L L E Q -L E I -T Y T E F D P E E E L A K C I A N K (120)
+ + + EQ E LE+ + E + IA
AcrIIA33 L F H E L A Y V S -P A -V A -D L E D R L N D E H Q V E Q A L E D L E N F -D W N R V F E K L T D Q Q F Q T A I A G C
MGV-GENOME-0343292_CDS_0091 N R K S E F Y G N G L K V I A E Y L E S I S H E D A L A -V V T Y Y Y F Y F G F G Y E D Q L I S D I K D D Q E D G V K F (180)
+ + Y +
AcrIIA33 T -S Q A -Y ---------------Y Q E -F E V -------------------------------
MGV-GENOME-0343292_CDS_0091 E H V E R S E T I (189)
AcrIIA33 -------I E
MGV-GENOME-0343292_CDS_0091 3 AcrIF13 0.55 View Alignment MGV-GENOME-0343292_CDS_0091 M K K L Y I Q -T N Q F A N G E L Q V E N T S Y E L C D T F K E L Y S V A S N L V D E N T L N F V E D N F I E Q N -Y K (60)
MK L I + +
AcrIF13 M K L L N I K I ---N -E -------F A V --------T A N ---T E ----------------A G -D
MGV-GENOME-0343292_CDS_0091 D -E -Y N G V Y E N D G D T -G E -F V G Q V F E N K V T E E Q F K E L -L E Q L E I T Y T E F D P E E E L A K C I A (120)
Y + ++ + ++ F + Y LA+
AcrIF13 -E -L Y L Q L P ---H T -P D -S -Q H S I N H E P L D D D D F V K E V Q -E I C D E Y F G K G D -R T L A R L S Y
MGV-GENOME-0343292_CDS_0091 N K N -R K S E F Y G -N G L K V I A E Y L E S I S H E D A L A V V T Y Y Y F Y F G -F G -Y E D Q L I S D I K D D Q E (180)
Y + D
AcrIF13 A G G Q A ----Y D S -Y T E -E D G ---V Y T T N T G D Q ----F -V --E H -S Y ------A ---D ---
MGV-GENOME-0343292_CDS_0091 D G V K F E H V E R S E T I (194)
E + + +
AcrIF13 -Y Y N V E V Y C K A D L V
MGV-GENOME-0343292_CDS_0091 4 AcrIIC5 0.55 View Alignment MGV-GENOME-0343292_CDS_0091 M K -K -L -Y I Q T N Q F A N G E L Q V E N T S Y E L C D T F K E L Y S V A -S N L -V D E N T L N F V E D N F I E Q (60)
M ++ T L ++ + E
AcrIIC5 M N N S I K F H V S Y -D ---------G T A R A L F N ---T K E Q A -E K -Y C L V E E I ---------N -
MGV-GENOME-0343292_CDS_0091 N Y K -D -E -Y N -G V Y E N D G D T -G -E F V G Q V F E N K V T E E Q F K E L L E Q L E I -T Y T E F D P E E -E (120)
N Y + + + +E +Y++
AcrIIC5 ---D -E -M -N G --Y -----K R -K -S W E E K L R E -E N C A S V Q D W V E K N Y T S S Y S D L ---F N -
MGV-GENOME-0343292_CDS_0091 L A K C I A N K N R K S E F Y G N G L K V I -A E -Y L E S I S H E D A L A V V T Y Y Y F Y F G F G Y E D Q L I S D I K (180)
L I ++ V Y + + +K
AcrIIC5 ---I C E I E V ----------S S -A -G Q -L V K I D N T E V D D F V E N C Y G F T -L E D D L E E F N K A K
MGV-GENOME-0343292_CDS_0091 D D Q E D G V K -F E H V E -R S E T I (200)
E
AcrIIC5 Q Y L Q K ---F -Y A --E -C E -N
MGV-GENOME-0343292_CDS_0091 5 AcrIIA15 0.53 View Alignment MGV-GENOME-0343292_CDS_0091 M K K -L --Y -I -Q T -------N ---Q F ----A N G E L -Q -V -E N -T -S Y -E L C D T F K E L Y S V (60)
M+K + + ++ + L
AcrIIA15 M R K T I E R L L -N -S E L S S N S I A V R T G V S Q A V I S K L -R -N -G K -K E L G N L -T L N S A E K L F E Y
MGV-GENOME-0343292_CDS_0091 A S N L V D E N T L N -F V E D N F I E Q N Y K D E Y N G V Y E N D G D T G E F V G Q V F E N K V T E E Q F K -E L L E (120)
+ + VY T + + T E ++
AcrIIA15 Q K E M ------E K ------V ------D T W I V Y R G R --T A D M N K S Y I A E G S T Y E E V Y N N F V D
MGV-GENOME-0343292_CDS_0091 Q L E I T Y T E --F D P E E E L A K C I A N K N R K S E F Y G N G L K V I A E Y L E -S I S H E D A L A V V T Y Y Y F (180)
+ L K + G+ + + +
AcrIIA15 K Y G Y D V L D E D I Y E I Q L L K K N G E -N L D D Y D V D S D G I --------N --N Y D K L D E F R E S ---
MGV-GENOME-0343292_CDS_0091 Y F G F G Y E D Q L I S D I K D D Q E D G V K F E -H V E R S E T I (214)
ED ++ + + V E
AcrIIA15 -D Y V D L E D Y D Y R E L F E N S S S Q V Y Y -H E F E I -T H E
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;