3D Structure for MGV-GENOME-0340779_CDS_0004 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold with pLDDT = 96.68 ;
Download
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see: Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0340779_CDS_0004 1 AcrIIA7 0.94 View Alignment MGV-GENOME-0340779_CDS_0004 M K F S E A L E H A K R G A R I S R E G W N G K G M F V L L I -N G D S I K -V A I ---------------H -E (60)
M F ALE +KRG + R GWNGKGMF+ DS+ I
AcrIIA7 M T F G Q A L E S L K R G H L V A R K G W N G K G M F I F -M R P E D S L P T N M I V N Q V K S L P E S F K R W V -A -
MGV-GENOME-0340779_CDS_0004 A --Y -G D P K K D G Y D V R D F L M M F T A Q S D L V -P W L A S Q S D I L A E D W C V -L (108)
GD D L M A +V WLASQ+D LA DW +
AcrIIA7 -N N -H G D S E T D R I K F T A Y L C M K A A D G T I V N G W L A S Q T D M L A N D W V I V E
MGV-GENOME-0340779_CDS_0004 2 AcrIE9 0.83 View Alignment MGV-GENOME-0340779_CDS_0004 M K F S E A L E H A K R G A R I S R E G W N G K G -M F V L L -I N G D S -I -K V A I H E A Y G D P K K D -G Y D V R (60)
M + + K G I+ G + +NG S I
AcrIE9 M E M Q --I N S R K L G R T I T F S R P -G A -S Y I F -A D L N G K S G T L G C Q I -C --S G ----G -G T M G
MGV-GENOME-0340779_CDS_0004 D F L M M F T A Q -S D L V -P W L A S Q S D I L A E D W -C -V L (94)
+ + A
AcrIE9 S T ---L S Y D G D -D Q A Q F E A I C R R W Y R A H V R -G -E
MGV-GENOME-0340779_CDS_0004 3 AcrIIA4 0.79 View Alignment MGV-GENOME-0340779_CDS_0004 M K F S E A L E H A K R -G A R I S R E G W -N -G K -G -M F V L L I N G D S I K V A I -H E A Y G D P K K D G Y D V (60)
M ++++ +K + G + + + N + V I + V
AcrIIA4 M N I N D L I R E I K N K D Y T V K L S G T D S N S I T -Q L I I R V N N D G N E Y V -I S E -S E N E -----S I V
MGV-GENOME-0340779_CDS_0004 R D F L M M F T A Q S D L V P W L A S Q S D I L ---A -E D -W C V -L (97)
F+ F + +
AcrIIA4 E K F I S A F K --N G W N Q E Y E D E E E F Y N D M Q T I T L K S E L N
MGV-GENOME-0340779_CDS_0004 4 AcrIF5 0.79 View Alignment MGV-GENOME-0340779_CDS_0004 M K F S E A L E H A K R G A R I S R E G W N G -K G -M F V L L I N G D S I K V A I H E A Y G ---D P -K ----K D (60)
M ++ + N V + V A
AcrIF5 M S R P T V V T -V --T E T P R ----N -P G -S Y E V N V E R D G K M V V G R A R A G S D P G A A A -A K A M Q M
MGV-GENOME-0340779_CDS_0004 G Y -D V R D F L M M F T A Q S D L V P W L A S Q S D I L A E D W C V L (96)
+ ++ ++ + +
AcrIF5 A M E W G S P N Y V I L G S -N K V L A F I P E --Q L R V ----K M
MGV-GENOME-0340779_CDS_0004 5 AcrIF19 0.78 View Alignment MGV-GENOME-0340779_CDS_0004 M -K F S E A L E H A K -R G A R I S -R -E G -W N ---G -K G M F V L L I N G D -S I K --V A I H E A Y G D P K (60)
M S E + + V + A +
AcrIF19 M K P L H T -M --N -Y D N N Q M S L V Y E S Y D E Y G F E Y S V K L K I S V R D Y R G --I D V S A F N A F P E W E
MGV-GENOME-0340779_CDS_0004 K D G -Y D V -R D F -L M M F T A -Q S D L -V P W -L A -S Q S D I -L A E D -W C -V -L (108)
M + + +
AcrIF19 D T -L R M -R D -R V -M S V E E I E N A M I S -R Y -K S L F I A -P -P D -C T Y E F D I
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;