3D Structure for MGV-GENOME-0340763_CDS_0043 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 94.49 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0340763_CDS_0043 1 AcrIIA26 0.75 View Alignment MGV-GENOME-0340763_CDS_0043 M D V F -L R N -I T -T D E D V -E V S L ---P -M ---D S -G -K -L -K E L T -G R ------D -E W I I A (60)
M + + + E E + + L + + I
AcrIIA26 M K K L Y I Q T N Q F A N G E L Q V E N T S Y E L -C D T F K E L Y -S -V -A S N L -V D E N T L N F V E D N F -I E
MGV-GENOME-0340763_CDS_0043 ------D -S P V --G E E -L -T S I L M L N E -L -V K -R F G E E N L M V L A E A F L L S E I E E K E P D D F (120)
+ + + + EE+ L+E ++ E +P++
AcrIIA26 Q N Y K D E -Y N G -V Y E N -D -G D T G E F V G Q V -F -E N K V T E E Q F K E L L E Q L E I T Y -T E F D P E E E
MGV-GENOME-0340763_CDS_0043 V I I D F -D N -E T A -C Y N D -G -------N G F I F T D W -E K G F V L H D L G Y V D F P F K Y T D E M E G Y (180)
++ G + V+ F E
AcrIIA26 L A K C I A N K N R K S E F -Y G N G L K V I A E Y L E S -I -S H E D A L A V V T Y Y Y F Y F -G F G ----Y E D -
MGV-GENOME-0340763_CDS_0043 V K F E Q L W Y T A E S S G W N A V I I N G R P Y L V C -K N (211)
+ G + R
AcrIIA26 Q L I S D I K D D Q -E D G V K F E H V E -R -S -E -T -I
MGV-GENOME-0340763_CDS_0043 2 AcrIF13 0.59 View Alignment MGV-GENOME-0340763_CDS_0043 M D V F L R N I T T D E D V E V -S L -P M D S G K L K E L -T G R D E W I I A D S -P V G E E L T S I L M L N -E L V (60)
M + ++ + + G DE + ++
AcrIF13 M K L L -N I K I N E -F A V T A N -T E ---------A -G -D E L Y L Q L P H T P D ---S Q H S I N H E P --
MGV-GENOME-0340763_CDS_0043 K R -F G -E -E N L -M V L A E A F L L S -E I E E K E P D D F V I I D F D N ---E T A C Y N -D G N G F I F T D W (120)
+ K + + + G T
AcrIF13 --L -D D -D -D F V K -E V Q E I C -D E Y -F G K G D R T L A R L S Y A G G Q A Y D S Y -T E -E D G V Y T T N T
MGV-GENOME-0340763_CDS_0043 E K G F V L H -D -L G -Y V D F P F K Y T D -E M E G Y V K F E Q L W Y T A E S S G W N A V I I N G R P Y L V C K N (179)
FV H + +
AcrIF13 G D Q F V E H S -Y -A D -Y Y N ----V E V -------------------------Y C K A -D --L V
MGV-GENOME-0340763_CDS_0043 3 AcrIIA33 0.52 View Alignment MGV-GENOME-0340763_CDS_0043 M D V F L R -N I T -T D E D V E V S L P M D S G K L K E L T -G --R -D E W I -I -A D S P V G E E L T -S I L M L (60)
M + T + KL E + DS + EL +
AcrIIA33 M I K W T G K -S T D -K G W I R T V E A E T Y Y K L L E T L V D K G Y I G D Y -I -D S D S Q L F H E L A Y V S P A V
MGV-GENOME-0340763_CDS_0043 N E L V K R F -G ---E E N L M -V -L A E A F L L S E I -E E K E P D D F V I -I D F -D N E T A C Y N D G N G F I (120)
+L R E++ +E F + + E F I + +A Y
AcrIIA33 A D L E D R L N D E H Q V E Q A L E -D -L E N F D W N R V F E K L T D Q Q F Q T A I A -G C T S Q A -Y -------
MGV-GENOME-0340763_CDS_0043 F T D W E K G F V L H D L G Y V D F -P F K Y T D E M E G Y V K F E Q L W Y T A E S S G W N A V I I N G R P Y L V C K N (180)
+
AcrIIA33 ----------------Y Q E -----------------F E V ------------------I -E
MGV-GENOME-0340763_CDS_0043 4 AcrIC1 0.51 View Alignment MGV-GENOME-0340763_CDS_0043 M D V F L R N I T -T ------D E -D --------V ----E --V -S -L -P M D S G K L K E L T G R D E W I (60)
M +++ E + +I
AcrIC1 M N N L K K T A I T H D G V F A Y K -N -T E T V I G S V G R N D I -V M -A -I -D A -T H ---G E F N -D K N F I
MGV-GENOME-0340763_CDS_0043 I A D S P V G E E L T S I L M L N -E L -V K R F G E E N L M V L A E A F L L S E I -E E K --------E P D D -F (120)
I G + + + + LA + +E ++ +
AcrIC1 I Y A D T N G N P -I --Y L -G Y -A Y L D D N N D A H I -D L A V -G A C N E -D D D F D E K E I H E M I -A E Q M
MGV-GENOME-0340763_CDS_0043 V I I D F ----D N ------E -T A C Y N D G N G F I F T D W E K ----G F V -L -H --D -L ---G Y -V D (180)
+ + D
AcrIC1 E L -A K R Y Q E L -G D T V H G T T R L A F D D D G Y M T V R L D Q Q A Y P D -Y R P -E -N D -D -K H I --M -W
MGV-GENOME-0340763_CDS_0043 F -P F K Y T -D E M E G -Y V K F E Q L W Y --T A -E S -S G W N A -V I I N G R P Y L V C K N (230)
T + L I
AcrIC1 -R A L A L T A --T G K E -L E V F W L V E D Y E D E --E V N S W D F D I -A D D -W R -E -L
MGV-GENOME-0340763_CDS_0043 5 AcrIIA15 0.50 View Alignment MGV-GENOME-0340763_CDS_0043 M D -V F ---L R N I T T D -E -D -V E V S L P M D S G K L K E L T G R -D E W I I A D S P V G E E L T S -I L -M (60)
M L + + + + + L + S
AcrIIA15 M R K T I E R L L N S E L S S N -S -I A V R -T G V S Q A V I S K L R N G K -K E L -G N L -T L N ---S A -E K -
MGV-GENOME-0340763_CDS_0043 -L -N E L V K R F G E E N L M V L A E A F L L S E I E E K E P D D F V I I D F -D N ----E T A -C Y N D ----- (120)
E K E D +++ + +
AcrIIA15 L -F -E Y Q K E M -----------------E K --V D T W I V Y -R G R T A D M N K S Y I A E -G S T Y E E
MGV-GENOME-0340763_CDS_0043 --------G N G F I F T -D W E K G F V L H D -------L -G Y V D F P F K Y T D E M E G Y V K F E -Q -L W (180)
+ D +L+ D +
AcrIIA15 V Y N N F V D K Y G Y D V L D E D I Y E I Q L L K K N G E N L D D -Y D V D S D G I N N Y D K L D E F ---R E -S D Y
MGV-GENOME-0340763_CDS_0043 Y T A E S S G W N A V I I N -G -----R P Y L V C K N (209)
+E + N + + +
AcrIIA15 V D L E D Y D Y R E L F E N S S S Q V Y Y H E F E I T H E
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;