3D Structure for MGV-GENOME-0335835_CDS_0074 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 90.46 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0335835_CDS_0074 1 AcrIE6 0.72 View Alignment MGV-GENOME-0335835_CDS_0074 M D E Y E L K W V S D D V S M E Y A Q E L V S R L N K A A E -Q E R N A Y Q L L K S A R E I Y D -S I ---Q -N D -M (60)
M L + + E A L +
AcrIE6 M -N N -D -----------T E V L E Q Q ---I K -A F E L L A D E L K D R L P ----T L E I L S P M Y -T A
MGV-GENOME-0335835_CDS_0074 T L E I Y D N A L D W Y M Y W A D T V D D I I -T -E I E ---S --A G -G -I I N (103)
YD + + +I+ +
AcrIE6 V M V T Y D L I G K Q L A S R R A E L I E I L E -E Q Y P G H A A D L S I K -N L C P
MGV-GENOME-0335835_CDS_0074 2 AcrIE1 0.70 View Alignment MGV-GENOME-0335835_CDS_0074 M D -E --Y E L K W -V ----S D ---D V S M E Y A Q E L V S -R L N K A A E -Q -E R N A Y Q L L K S A R E -I (60)
M+ V S E A ++S + AE +A L
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E E A A S I L S L I V F -Q A E T -L S D Q A N E L ----A N Y -
MGV-GENOME-0335835_CDS_0074 Y -D -S I Q N D M T L E -I Y D -N A -L D W Y M Y W A D T V D D I I -T E I E S A G G -I ---I -N (113)
+E + N W++ ++ + + G +
AcrIE1 I R -R -Q G L -E E A E G A C -R N -I D I M R A K W V E V C G E V -N Q H G I R V Y G D A I D R D V D
MGV-GENOME-0335835_CDS_0074 3 AcrIIC4 0.59 View Alignment MGV-GENOME-0335835_CDS_0074 M D -E -Y E -L K W -V S D -D -----V S M E -Y A Q E L V S R L N K A A E Q E R N A Y Q L L K S A R E I Y D S I (60)
M + S+ V + A+EQ +A K+ +
AcrIIC4 M K I T S S N F A T I A T S E N -F A K L S V L P K N H R E P I K G L F K S A V E Q F S S A R D F F K N E N Y -S K E L
MGV-GENOME-0335835_CDS_0074 Q N D M T L E I Y D -N A L -D W Y M -Y W A D T V D D I I T E I E S A G G I I N (101)
A+ ++ + +I +E G
AcrIIC4 A E K ----F N K E -A V N ----E -A V E K L Q K A I D L A E K Q G I Q -F
MGV-GENOME-0335835_CDS_0074 4 AcrIF23 0.57 View Alignment MGV-GENOME-0335835_CDS_0074 M D E -Y ---E ---L K --W ------V -S D ----------D ---------------------V (60)
M + +
AcrIF23 M T N F Q T W L D S A D --I P V Q Q N G Q W -I --D L E T G I A Y D P -S Y N Y A A N T R R A S L S P R G I D A R A
MGV-GENOME-0335835_CDS_0074 --------S M -------E Y -A Q E L ----V S R L N K A A E Q E R -N A Y Q -L L K S A R E I Y D S I Q N (120)
E A + V+ N + LL A+ N
AcrIF23 V A K T F G G R A L T G T A R Q K E -W A E K I R A E K V Q Q M N Q D Q A E M A C D -P S G L L T A A K F W I -E N R N
MGV-GENOME-0335835_CDS_0074 D M T L E I Y D N A L D W Y M Y W A D T V D ------------D I I T E I E S A G G I -I -N (170)
D + + + + I+ E +
AcrIF23 D S -A Q E I A G F V M Q Q K A L L A Q H R S A K A A G Q A D K V A K I A A E Y N A L T A -R W G F
MGV-GENOME-0335835_CDS_0074 5 AcrIC3 0.55 View Alignment MGV-GENOME-0335835_CDS_0074 M D E Y E L K W V S D ----D V S M -E Y A Q E L -V S R L N K A A E -Q ---E -R -N A -Y -Q L L K S A R E I Y (60)
M ++ + + A+ + + +
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V V A -S S -G Q V K F M A D K T D R G -L -E S -R -F L V P E A G N R R I
MGV-GENOME-0335835_CDS_0074 D S I Q ----N D M T L E I Y D N A L D W Y M Y W A D T V D -D I I T E I E S A G G I I -N (107)
+ + + + ++ + ++ E ++ ++
AcrIC3 E V A L T G R D L E A A N A L F S E L A A S V E A T N E M Y -R E L D A E R A Q I N K A L E G
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;