3D Structure for MGV-GENOME-0334104_CDS_0024 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 81.85 ;
Download
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0334104_CDS_0024 1 AcrIE6 0.72 View Alignment MGV-GENOME-0334104_CDS_0024 M K -T N K F I E N S T K E L L D R L K E S F A N K N V E --Y K E -S D Q L A L L R R I S N I K M S I C A A E I H I I (60)
M + +E++ K L + + A+ +
AcrIE6 M N N D T E V L E Q Q I K A F E -L L A D E L K D R L P T L E I L -S P M Y T A V M V T Y D ---L I G K Q L A S ---
MGV-GENOME-0334104_CDS_0024 E L L Q Q N A I D I E V L -T -N -A T E K Y N K L S E E L T I L N S Y K T I F G -I -N (105)
A + E Y + L S K+
AcrIE6 -R R ---A E L ----I -E -I L E E Q Y P G H ---A A D L -S I K N ---L -C P
MGV-GENOME-0334104_CDS_0024 2 AcrIE1 0.66 View Alignment MGV-GENOME-0334104_CDS_0024 M -K T N K F I E N S T K E L L D R L K E S F A N K N V E Y K E S D Q L A L L -R R I S N I K -M S I -C A A E I H I I (60)
M K + +L + E +L + + ++
AcrIE1 M E K K L ---S D A Q V -A L V A A W R K Y P D L R E -S L E E A A S I L -S L I V F Q -A E T L -S D -Q A N E L A
MGV-GENOME-0334104_CDS_0024 E L -L Q Q N A I D I E V L T N A T E K -Y N K L -S E E -L -T -I -L N -S -Y K T I F -G -----I -N (116)
Q + ++E + + K E + G
AcrIE1 N Y I R R Q G L E E A E G A C R N I D I M R A K -W V E -V -C -G -E V -N -Q H G I R V Y G D A I D R D V D
MGV-GENOME-0334104_CDS_0024 3 AcrIIC4 0.60 View Alignment MGV-GENOME-0334104_CDS_0024 M K -T N K F I E N S T K E L --L D R L K E S -F A N K N V E Y K E S D Q L A L L R R I S N I K M S I C A A E I H I I (60)
MK T+ + K + + ++ + A
AcrIIC4 M K I T S S N F A ----T I A T -----S E N -F A K L S V L P K N H R E P I K G L F K S A V E Q F S S A R D F F K
MGV-GENOME-0334104_CDS_0024 E L L Q Q N -A I -D I -E V L T -N A T E -K Y N -K -L S -E E L T -I L N -S Y K T I F -G -I -N (113)
+ + + + A +
AcrIIC4 -N E N Y S K E L A E -K -F N K E -A V N E -A V E -K -L Q K A -I D L -A E K -Q ---G -I -Q F
MGV-GENOME-0334104_CDS_0024 4 AcrIF23 0.59 View Alignment MGV-GENOME-0334104_CDS_0024 M K -T N K F I ------E -N --------------S T ---------------------------(60)
M + ++ +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P -S Y N Y A A N T R R A S L S P R G I D A R A V A K T F
MGV-GENOME-0334104_CDS_0024 -K ----E ----L L -D -R -L -K -E -S -F -A N K N V E Y K E S D Q -L A L -L -R R -I -S N I K M -S - (120)
V
AcrIF23 G -G R A L T G T A R Q -K -E -W -A -E -K -I -R -A E K V Q Q ---M -N Q D -Q -A E -M -A C D P -S G -L
MGV-GENOME-0334104_CDS_0024 I C -A A E I -H I I E L L Q Q N ----A I D I E V L T N A T E K Y N K L ----S -E -E -L -T I L N S Y K T I F (180)
A IE + + A + + + + + ++
AcrIF23 -L T A -A K F -W I E N R N D S A Q E I A G F V M Q Q K A L L A Q H R S A K A A G Q A -D -K -V A K I A A E Y N A L
MGV-GENOME-0334104_CDS_0024 G -I --N (186)
AcrIF23 T A R W G F
MGV-GENOME-0334104_CDS_0024 5 AcrIC3 0.53 View Alignment MGV-GENOME-0334104_CDS_0024 M K T N K ---F I E -N ------S T K E L L D R L K --E -S F A N K N V E Y K E ------S D Q -L A L -L R (60)
M + ++ A K + A R
AcrIC3 M S I Q -V T S T -N G R T V N L E I E L G S V V A S S G Q V -K F M A D K -T -D R -G L E S R F L V -P E A -G N R
MGV-GENOME-0334104_CDS_0024 R I -S --N I K -M S I C A A E I H I I E L -L -Q -Q N A -I D I E V L T N A T -E K -Y N -K L S E -E L T I L N (120)
R + AA + L A + N L +
AcrIC3 R -I E V A L T -G R D L E A A N A ----L F -S -E -L A A -S ------V -E -A T -N E -M Y R E -L D A E R
MGV-GENOME-0334104_CDS_0024 -S Y -K T I F G I N (131)
+
AcrIC3 A Q -I N K -A L E G
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;