3D Structure for MGV-GENOME-0326220_CDS_0008 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 85.85 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0326220_CDS_0008 1 AcrIE1 0.72 View Alignment MGV-GENOME-0326220_CDS_0008 M N K K E I E E Y L K R I D E L E N K L T G E D K E T Y D W L I Y G Y H K C I K L L N E A E E Q C K R Q K E V I D K S I (60)
M K + + L Y L + +L+ + Q + + +
AcrIE1 M E -K K L S D A Q V ---A L ----V A -A W R K Y P D L R E S L E E A A S I L S L I V F Q A E T L S D Q A N E L A
MGV-GENOME-0326220_CDS_0008 D F I K N G D L L Y L A N K -N -S I V H R N N I E I R V V A D R L ----N D L L Q I L E -D K E V S E (113)
I+ L + + + V + + + D++V +
AcrIE1 N Y I R R Q G L E E A E G A C -R -N I D I M R A K W V E V C G E V N Q H G I R V Y G D A -I D R D V -D
MGV-GENOME-0326220_CDS_0008 2 AcrIE6 0.64 View Alignment MGV-GENOME-0326220_CDS_0008 M N K K E I E E Y L K R I D E L E N K L T G E D K -E T Y D W L I Y G Y H K C I K L L N E A E E Q C K R Q K E V I D K S (60)
MN + E + L+ + + L + D
AcrIE6 M N -N D T E V L E -----------Q -Q I K -A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I
MGV-GENOME-0326220_CDS_0008 I D F I -K N G D L L Y L A N K N S I V H R N -N -I E I R -V -V -A D R L N D L -L -Q I -L E D K E V S E (116)
+ E+ + K +
AcrIE6 G K Q L A ---------------S -R R -A -E L I E -I -L E E Q Y P G H A -A -D L -S I K N L C P
MGV-GENOME-0326220_CDS_0008 3 AcrIC3 0.57 View Alignment MGV-GENOME-0326220_CDS_0008 M N K K E I E E Y L K R I D E L E N K L --T G E D K E T Y D W L I Y G Y H K C I K L L N E A E E Q C K R Q -K -E -V (60)
M+ + ++ + + +
AcrIC3 M S I Q V T S T -N ---G R T V ---N L ---E -I E L G S V V A S S G Q V K F M A D K T D R G L -E S R -F -L -
MGV-GENOME-0326220_CDS_0008 I D K S I D --F I -K N -G D L L Y L A N K N S I V ---H R N ----N -I -E I R V -V -A -D -R -L ----N (120)
+ +A + +
AcrIC3 ------V P E -A --G N R R I E V A L T G R D L E A A N A L F S E L -A -A S V E -A -T -N -E -M -Y R E L D
MGV-GENOME-0326220_CDS_0008 D L L Q I L E D K E V S E (133)
+
AcrIC3 A E R A Q I N K A L -E G
MGV-GENOME-0326220_CDS_0008 4 AcrIIA19 0.57 View Alignment MGV-GENOME-0326220_CDS_0008 M N -K K -E I E E Y L K R I D E L E N K L T G E D K E T Y D W L I -Y -G Y H K C I K L L N E A E -E Q C K R Q -K E (60)
M E K + + LI K L ++ R E
AcrIIA19 M K L I V E V E E T N Y K N L V N Y T K L T N E S H N I L V N R L I S -E Y I T K P Y E L R L D L S E R Y S N R D L I E
MGV-GENOME-0326220_CDS_0008 V I D K S I D F I K N G D --L L -Y L A N K N S I V -H R N -----------N I E I R V V A D R L N D L L Q I L (120)
I+ K + LAN + + E+ D + +
AcrIIA19 F K F M L I E Y C K E A L Q D I K E -L A N S D E A -Y -E T D E A F E A V F R Q L F E E V I S N P D T V L K A F H S Y
MGV-GENOME-0326220_CDS_0008 E D K -E V S E (128)
E +
AcrIIA19 T S F L E E N K
MGV-GENOME-0326220_CDS_0008 5 AcrIIA11 0.57 View Alignment MGV-GENOME-0326220_CDS_0008 M N K K E I E ---E Y L K ---R I D E L E N K ---------L T G E D K E T Y D W L I Y G Y H K C -I K ----(60)
M + E + + +DK L+
AcrIIA11 M A D M T L R Q F C E R Y R K G D F L A K D R E T Q I E A G W Y D W -F C D D K A L A G R L A K I W G I -L K G I T S D
MGV-GENOME-0326220_CDS_0008 L L -N E A -E E Q C K R Q K E V I D K S I D F I K N -----G ---D L -L Y L -A N -K ------N ------(120)
+ K + + D ++ +L
AcrIIA11 Y I L D N -Y R V W F K N N C P M V G P L Y D D V R F E P L D E E Q R D E L Y -F G V -A I D D K R R E K K Y V I F T A
MGV-GENOME-0326220_CDS_0008 -----------------------------S I V H R N ----N I E -I ----R V V A D -R -L -N - (180)
+
AcrIIA11 R N D Y E N E C G F N N V R E V R Q F I N G W E D E L K N E E F Y K A R E K K R Q -E -M E E A N N K F A E -I -M -Q
MGV-GENOME-0326220_CDS_0008 D -L L -Q -I L E D K E V S E (196)
+ + +
AcrIIA11 -R -A D -E -I L W N L K E D
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;