3D Structure for MGV-GENOME-0321550_CDS_0006 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 92.60 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0321550_CDS_0006 1 AcrIE6 0.71 View Alignment MGV-GENOME-0321550_CDS_0006 M S E T S S R V R L M A N -L -Q A A -V A E A V S G T M E E R G R G F A S D R E A W A E L K E C -I E R -T -K Q -M (60)
M+ + + A +E + +
AcrIE6 M N ---N D T ---E -V -L E Q -Q -I K A F E L L A D E L K D R L P T L E I L S P M Y T -A V M V -T -Y D -L I
MGV-GENOME-0321550_CDS_0006 H T D I -E K V H K E M W S A V K D R N E D A F A A L S Q E F E -R -S S R -I -L A E E -W A Q T S A L A K I A V I S (120)
A L E A I
AcrIE6 G K Q -L A -----------S ----R R A E L I E I L E E -Q -Y P G -H ----A -A -D L ---S I K -N -
MGV-GENOME-0321550_CDS_0006 E E -G (124)
AcrIE6 -L C P
MGV-GENOME-0321550_CDS_0006 2 AcrIE1 0.66 View Alignment MGV-GENOME-0321550_CDS_0006 M S E T S S R V R L M A N L Q -A -A -V A E A V S G T M E E R G R G F A S D -R E -A W A E L K E C -I E R T K Q M -(60)
M ++ A+ S A L + +
AcrIE1 M E K ---K L -------S -D -A -Q V A L V A A W R K Y P D L R E S -L E -E A A S I L -S L I V -F Q A E T L
MGV-GENOME-0321550_CDS_0006 H T D I E K -V H K E M W S A V K D -R N E ----D A F A A L S Q E F E R S S R I L A E E W A Q T S A L A K I A V I S (120)
+ + + + + ++
AcrIE1 S D -Q A N E L A N Y I R -R Q G L E E A -E G A C R N I D I M R A K W V E V C G E V N Q H G I R V --Y G D A I D R D
MGV-GENOME-0321550_CDS_0006 E E G (123)
AcrIE1 -V D
MGV-GENOME-0321550_CDS_0006 3 AcrIIC4 0.61 View Alignment MGV-GENOME-0321550_CDS_0006 M S E T S S R V R L M A N L -Q A A V A E A -V S G T M -E -E R G R G F A -S D R E A W A E L K E C I E R T K Q M H T (60)
M N + E + +K
AcrIIC4 M K --I -T S ---S N -F A ----T I A -----T -S E N F A K L S V L P K N H R E P I K G L F K S ------
MGV-GENOME-0321550_CDS_0006 D I E K V H K E M W S A V K D R N E D A F -A A L -S Q E F E R S S R I L A E E W A Q T S A L A -K -I A -V I S E E -(120)
+ K + + ++ E + ++ A
AcrIIC4 -A V E Q F S S A R D F F K N -E N Y -S K E L -A E K F ---N K E A V N E A V E K L Q K A I D -L -A E K Q G -I Q
MGV-GENOME-0321550_CDS_0006 G (121)
AcrIIC4 F
MGV-GENOME-0321550_CDS_0006 4 AcrIF23 0.59 View Alignment MGV-GENOME-0321550_CDS_0006 M S E ---T ---S S R -V R L M A ---N -L Q ---A ------------------------------(60)
M+ V +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A -Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F
MGV-GENOME-0321550_CDS_0006 --------------------A V A E A V -S ----G T -M -E -E R G R -G F A S D R E A W A E L K E C I (120)
+ + + + + +
AcrIF23 G G R A L T G T A R Q K E W A E K I R A E K V Q Q -M N Q D Q A E -M -A -C D -P S G L L T A A K F W I E N R N D S A
MGV-GENOME-0321550_CDS_0006 E R T K Q M H T D I E K V H K E M W S A V K D R N E D A F -A A L S Q E F E R S S R -I -L A E E W A Q T S A L A K -I (180)
+ SA A
AcrIF23 Q E I A G F V M Q Q K A L L A Q H R S A K A A G ---Q -A ----D K V ---A -K -I ----A A E Y ---N -A -
MGV-GENOME-0321550_CDS_0006 A V I S E ---E G (190)
+
AcrIF23 --L -T A R W G F
MGV-GENOME-0321550_CDS_0006 5 AcrIF3 0.58 View Alignment MGV-GENOME-0321550_CDS_0006 M S -E T S S R V R L -M A N L Q A A V A -------E A V -S G T -M -E E R G R -G F A S D R E A W A E L K E C -(60)
MS S + +A +A + E + L
AcrIF3 M S S T I S D ---R I I S R S V I E A A R F I Q S W E D A -D P D N L -T E S Q V L A A S S F A A R L H E G L Q A T V
MGV-GENOME-0321550_CDS_0006 I E R T K Q M H T --D -I -E -K -V H -K E -M W S A V K D -R ------N E ----D A F A A L S Q E -F E R -(120)
+ R + A+ + + +
AcrIF3 L Q R L V D E S N R D -E -Y -R -E F -Q -A W -E E A L L N A D G R V T S N P -F A D W G W W Y R I A N V M L A -T
MGV-GENOME-0321550_CDS_0006 S S ----R I -L -A -E E -W A Q T S A L A K I A V -I S -E --E -G (158)
S + A+ E
AcrIF3 A S Q N V G V A W -G -S H -V H G R L M A I F Q D R F Q Q -H Y E D E E C
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;