3D Structure for MGV-GENOME-0320585_CDS_0095 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 94.45 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0320585_CDS_0095 1 AcrIE6 0.75 View Alignment MGV-GENOME-0320585_CDS_0095 M M G W K K R L I K E R ---D E L Q S R L -D -R L -S V F I V G -F S F A K L D -Q R T K S L L R I Q H G L M Q D Y (60)
M L + L L + + T L+ Q
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K -D -R L -P T L E I L S P M Y T A V M -V T Y D L I G K Q L A S R R A E
MGV-GENOME-0320585_CDS_0095 -L A V L N ---M -R -I E R L -G ---H -E (85)
+ +L + L
AcrIE6 L I E I L E E Q Y P G -H A A D L S I K N L -C P
MGV-GENOME-0320585_CDS_0095 2 AcrIIC4 0.61 View Alignment MGV-GENOME-0320585_CDS_0095 M M --G -W K K R ------L -I -------K -E ----R D E L Q S R L D -R L -S V F I V G F S F A K -L D (60)
M K L + S F
AcrIIC4 M K I T S S N F A T I A T S E N -F -A K L S V L P K N -H R E P I K G L F K S A V E -Q F S S A R D F F K N E N Y S K
MGV-GENOME-0320585_CDS_0095 Q R T K S L L R I Q H G L M Q D Y L A V L N M R I E R L G H -E (92)
+ + L + +E+ G
AcrIIC4 E L A E K F N K E A V N E A V E K L Q K A I D L A E K Q G I Q F
MGV-GENOME-0320585_CDS_0095 3 AcrIE1 0.60 View Alignment MGV-GENOME-0320585_CDS_0095 M M ---G -W -K K R -L I ------K -E --------R -D -E -------L Q S R L D -R L S V F I V G F (60)
M L+ L ++
AcrIE1 M E K K L S D -A Q V -A L V A A W R K Y P D -L R E S L E E A -A -S -I L S L I V F Q A E T L S D -Q A N E L A N Y
MGV-GENOME-0320585_CDS_0095 S F A K -L D Q R T K S L L R I Q H G L M Q D Y L A V L N ----M -R I E R L ----G -H ---E (111)
+ + +M + + + R+ +
AcrIE1 I R R -Q -G L E E A E G A C R N I D I M R A K W V E V C G E V N -Q H G I R V Y G D A I D -R D V D
MGV-GENOME-0320585_CDS_0095 4 AcrIF23 0.59 View Alignment MGV-GENOME-0320585_CDS_0095 M M G W K K R ------L I -----K ---------------E -R -----------D ---------(60)
M +
AcrIF23 M T N F Q T W L D S A D I P -V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G -I D A R A V A K T
MGV-GENOME-0320585_CDS_0095 -----------------E L Q S R -----------L D R L S V -F I V G F -S -F A K -L ---D Q R T (120)
+ + F
AcrIF23 F G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A C D P S G L -L T A A -K F W I E N R N D S A Q E
MGV-GENOME-0320585_CDS_0095 K S L L R I Q H G L M ----Q --------D Y L A V L N M R I E R L G -H --E (163)
Q + D +A + L +
AcrIF23 I A G F V M Q Q K A L L A Q H R S A K A A G Q A D K V A K I A A E Y N A L T A R W G F
MGV-GENOME-0320585_CDS_0095 5 AcrIC3 0.53 View Alignment MGV-GENOME-0320585_CDS_0095 M M -G W K K R L I ------K E ----R ----D ----E L Q S R ----L D ------R -L S -V F I V G F (60)
M E + L+ I
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V -V A S S -G Q V K F M A D K T D R G L E S R F L V P E A -G N R R I E V A
MGV-GENOME-0320585_CDS_0095 S F ----A -K L ----D Q R T K S L L R -I Q -H -G -L M Q D -Y L A V L N -M R I -E R L G H E (113)
+ + + M L + I ++
AcrIC3 L T G R D L -E -A A N A L F S E L A A S V -E -A T -N -E -M Y R E -L D A E R A Q -I N -K A L E G
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;