3D Structure for MGV-GENOME-0309763_CDS_0076 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 90.28 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0309763_CDS_0076 1 AcrIE6 0.70 View Alignment MGV-GENOME-0309763_CDS_0076 M E I C T S I P I K E A I Q ----K -L E -C -I -A -R -E Y G L A V I E G T E N G N ----D Y P D A A D N L R F (60)
M + + I + + + + Y + +L
AcrIE6 M N -N D T E V L E Q Q I K A F E L -L A -D -E -L -K -D R -L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S
MGV-GENOME-0309763_CDS_0076 I G E L I F -D M -K C T -I -E D K -K R -Q -K S -K -V (91)
+
AcrIE6 R R A E L I E I -L E E -Q -Y P G -H A A D L S I K N L C P
MGV-GENOME-0309763_CDS_0076 2 AcrIE1 0.64 View Alignment MGV-GENOME-0309763_CDS_0076 M E -I --C T S I -------------P -I -------K -E -A -I -Q -K -L E -C -I A R E Y G L A V I (60)
ME ++ + + + ++
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E E A A S I L -S -L -I -V -F -Q A -E -T L S D -Q A N E L A
MGV-GENOME-0309763_CDS_0076 E G T -E N G -N D Y P D A A D N L R F I G E L I F D M K C T I E D K ----K R Q --K -S K -V (110)
+G + A N+ + + +
AcrIE1 N Y I R R Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I -D R D V D
MGV-GENOME-0309763_CDS_0076 3 AcrIIC4 0.57 View Alignment MGV-GENOME-0309763_CDS_0076 M E I ----C -T -S I --------------P -I K E -A I Q -K -L E -C -I A R E Y G L A V I E G T E N G (60)
M I I +E I ++ + + N
AcrIIC4 M K I T S S N F A -T -I A T S E N F A K L S V L P K N H -R E P -I K G -L F -K -S A V E -Q F S S A R D F F K N E
MGV-GENOME-0309763_CDS_0076 N -D Y P D A A D N L R -F I -G E L I F D M -K C T I -E D -K K R Q K -S K V (101)
N A + + E++ + +
AcrIIC4 N Y S K E L A E K F N K E -A V N E A V E K -L Q K -A I D -L -A E K Q G I Q F
MGV-GENOME-0309763_CDS_0076 4 AcrIF25 0.56 View Alignment MGV-GENOME-0309763_CDS_0076 M E I --------C T S I ---------------------------------------------(60)
M+
AcrIF25 M D N D D K K P D A L I H L R V P A E V K G R W V K E S R L E G M K L T D W I T G R V E A K A L S I A E V L E E A A A M
MGV-GENOME-0309763_CDS_0076 --------------P ----I -K -E A ----I -Q K -L E C -I ------------A R E Y -G L A V (120)
+ ARE ++
AcrIF25 A R S L E D S P I F Y R N K L C A D G -I -V -T I Q Q Q -A A -R F S -A A T D D A T R L D A A L W A R E -G Y Q L L
MGV-GENOME-0309763_CDS_0076 I E G T E ---N -G -N -------D Y -P D A A D N -L R F I G E L I F D M K C T I E D K -K R Q -K S --K V (179)
G A + +R G +
AcrIF25 S S G L P D S Y -S -G -A V P N E G R T G W -V T A S Q M A R L F G G E A L W I E R -C Q Q E L G -G A G K E D G R
MGV-GENOME-0309763_CDS_0076 5 AcrIC3 0.54 View Alignment MGV-GENOME-0309763_CDS_0076 M E I C T S I ----------P I ---K -------E -A I Q ----K -L E -C ---I A -R -E Y -G L A V (60)
M I + + + L ++ +
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V V A S S G Q V K -F M A D K T D R -G L -E -S R F L V P -E A -G N R R I
MGV-GENOME-0309763_CDS_0076 I E G --T E N G N D ----Y P D A A D N L R F I G E L I F -D M -K C T -I E D K -K R Q K S K V (111)
++A ++ E +
AcrIC3 E V A L T G R D L E A A N A L F S E L A A S V E A T N E M Y -R E -L D A -E R A Q -I N -K A L E G
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;