3D Structure for MGV-GENOME-0307578_CDS_0001 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold with pLDDT = 86.93 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see: Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0307578_CDS_0001 1 AcrIE6 0.84 View Alignment MGV-GENOME-0307578_CDS_0001 L S K I I R L K L A Q -Y T -N -V -Y Y L C R V K L K H I I T -M S N E T D Y L I S L L M Q N K A K K K M L D -F -V (60)
T I D L L + +
AcrIE6 M -N ------N -D -T E -V -L -E ---Q Q ---I K -A F E L L A D E L K D R L P T L E I L -S P M Y T -A -
MGV-GENOME-0307578_CDS_0001 -F -E N N S D A D E K K M N A I L D E K L R -V E K N I E -N I E -K -A L K E L E -K (105)
+ D+ K E + +E + + +K L
AcrIE6 V -M -V T Y D L I G K Q L A S R R A E L I E I L E E Q Y P G H A -A D L S I K N L -C P
MGV-GENOME-0307578_CDS_0001 2 AcrIIA34 0.83 View Alignment MGV-GENOME-0307578_CDS_0001 L S K I I R L K L A Q Y T ----N V Y Y L C R V ---K L K ----H -I -I -T -M -------S -N -E -T -D (60)
I + + + K+K
AcrIIA34 M K -N I A N E I K T I R Y A F E D G R S T Q K S I M R K I K A L T D -Q -F -E -T -M D D L I D S L N -S -Y -A -
MGV-GENOME-0307578_CDS_0001 -Y -L -I -S -L L M Q N K A K K K M L D F V F E N N S D --------A ---D E ----K --K M N A I L --- (120)
+ + + + +N+ + K + +
AcrIIA34 D -T -H -Y -T W A I T Y F Q L A R I I I S F Q A S N N -T T S E K K I D L Q S G P -I E V N G K L K I R V T V D E F
MGV-GENOME-0307578_CDS_0001 -D E -K -L -R -V E K N I E N I E K A L K E L E K (147)
+E I K++KEL
AcrIIA34 M A -D -L -A -N -W E H L E D I K K L A K E L -A
MGV-GENOME-0307578_CDS_0001 3 AcrIE1 0.83 View Alignment MGV-GENOME-0307578_CDS_0001 L S K I I R L K L A Q Y T N V Y Y L C R V K L K H I I T M S N E T D Y L I S L L M Q N K A K K K M L D F V F E N N S D -(60)
K + + + + + ++ + + L +
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E E A A S I L S L I V F Q A E T L S D Q A N E L A N Y I R R Q G L E
MGV-GENOME-0307578_CDS_0001 ---A D E K K M N A I L D E K L R V E K N I E -N I E -K A L K E ----L -E K (102)
+ + + V + ++ +
AcrIE1 E A E G A C R N I D I M R A K W V E V C G E V N Q -H G I R V Y G D A I D R -D V D
MGV-GENOME-0307578_CDS_0001 4 AcrIF15 0.81 View Alignment MGV-GENOME-0307578_CDS_0001 L S K I I R L K L A Q Y T -N V Y Y L C R V -K L K H I I T M S N E T D Y L I S L L M Q N K A K K K M L D F V F -E N -(60)
+Y + + + + + + V
AcrIF15 M --T -------T I T I A Y E ----V -------S N D K V E T I K T M V E S -Q ---Q I H -N V N F N G E
MGV-GENOME-0307578_CDS_0001 N S D A D E K K M N A I L D E K L R V E K N I E N I E K A L K E L E K (95)
++ + I + + K + I +++
AcrIF15 E F T I E R G D F T S I D K D E A E H V K L L N K I Q D I I H G -Y S
MGV-GENOME-0307578_CDS_0001 5 AcrIIA19 0.79 View Alignment MGV-GENOME-0307578_CDS_0001 L S K I I R L ---K -L -A -Q -Y T ----N V ----Y Y -L C R V -----K L K H I I T M ---------S (60)
K+I L + +
AcrIIA19 M -K L I V E V E E T N -Y -K -N L V N Y T K L T N E S H N -I L V N -R L I S E Y I T K P Y E L R L D L S E R Y S -
MGV-GENOME-0307578_CDS_0001 -N E T D Y L I S L L -M Q N K A K K K M L D F V F E N -----N S D A ----D E K K M N A I L D E K L R V E K N I (120)
+ L K + + + + +A ++ V K
AcrIIA19 N R D L I E F K F M L I E Y C K E A L Q D I K E L A N S D E A Y E T D E A F E A V F R Q L F E E V I S N P D T V L K A F
MGV-GENOME-0307578_CDS_0001 E N I E K A L K E -L -E K (134)
+ L K
AcrIIA19 H S Y T S F L E -E -N -K
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;