3D Structure for MGV-GENOME-0307430_CDS_0004 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 95.94 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0307430_CDS_0004 1 AcrIE6 0.75 View Alignment MGV-GENOME-0307430_CDS_0004 M E N E L E K ---T E L H I E ----R -L K -A ----A I M M A Q ----R K A R I L E T D M S E E I D R L L G L (60)
M N+ E + E L + + + + +
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D -E L -K -D R L P T L E I L -S P M Y T A V M V T Y D L I G K Q L A S R R A E
MGV-GENOME-0307430_CDS_0004 L S E A -L K K R D Y I K E N -L -K -K -N (83)
L E+ K
AcrIE6 L I E I L E E Q Y P G H A A D L S I K N L C P
MGV-GENOME-0307430_CDS_0004 2 AcrIE1 0.62 View Alignment MGV-GENOME-0307430_CDS_0004 M E ---N -E -L -E -K -T -E -------------L -H -I -E -------R -------L K A A -I M (60)
ME +
AcrIE1 M E K K L S D -A -Q -V -A -L V A A W R K Y P D L R E S L E E -A -A -S I L S L I V F Q A E T L S D Q A N E L -A
MGV-GENOME-0307430_CDS_0004 -M -A Q R K A R I L E T D M S E E I D R L L G ---L -L -S -E -A -L -K -K -R D Y I K E N -L K -K -N (117)
+ R ID + +
AcrIE1 N -Y I R R Q G L E E A E G A C R N I D I M R A K W V E V -C -G -E -V -N -Q -H G I R V Y G D A I D R D V D
MGV-GENOME-0307430_CDS_0004 3 AcrIIC4 0.60 View Alignment MGV-GENOME-0307430_CDS_0004 M -E -N -E L E K T ---E ----------L ----------H I E R L K A -A I M -M A Q R K A R I L E T D (60)
M + E + + +
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E P I K G L F K S A V E Q F S S -A R D -F F K N E N Y S K E L
MGV-GENOME-0307430_CDS_0004 M S E E I D -R L L -G -L L S -E -A L -K K -R D Y I K E N L K K N (96)
++ + L K D + +
AcrIIC4 A E K F N K E -A V N -E -A V E -K -L Q K -A I D L A E K Q G I Q F
MGV-GENOME-0307430_CDS_0004 4 AcrIF23 0.57 View Alignment MGV-GENOME-0307430_CDS_0004 M E N ---E L E K -T ---E -L H I E ---------------------------------------(60)
M N L+
AcrIF23 M T N F Q T W L D -S A D I P V Q Q -N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T
MGV-GENOME-0307430_CDS_0004 -----------------R L K A ------------------A I M M A Q R K A R -I -L E T D M S E - (120)
+++A + A + +D
AcrIF23 F G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A C D P S G L L T A A K F W I E -N -R N D S A Q E
MGV-GENOME-0307430_CDS_0004 ------E I D R L L G -L L --------S E A L K K -R D -Y I -K E N L K -K --N (167)
LL + + K L +
AcrIF23 I A G F V M Q Q K A L L -A Q H R S A K A A G Q A D K V A K I -A A -E Y -N A L T A R W G F
MGV-GENOME-0307430_CDS_0004 5 AcrIC3 0.54 View Alignment MGV-GENOME-0307430_CDS_0004 M -E N E L E K ---T E -------L H I E --------------R -L K A -----------A I ----(60)
M + T + R
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V V -A S S G Q V K F M A D K T D R G -L E S R F L V P E A G N R R -I E V A
MGV-GENOME-0307430_CDS_0004 --M M A Q -R K A R I L E T D M S E E I D R L L G L L S E A L K K R D Y I K E N L K K N (105)
A +L ++ ++ E+ R I L
AcrIC3 L T G R D L E -A A N A L F S E L A A S V E A T N E M Y R E L D A E R A Q I N K A L E -G
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;