3D Structure for MGV-GENOME-0305212_CDS_0071 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold with pLDDT = 87.09 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see: Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0305212_CDS_0071 1 AcrIE6 0.88 View Alignment MGV-GENOME-0305212_CDS_0071 M N I -H K S I L E -L S S K A K M Q Q T V A S A L K I L D E Y E F Q S A N I T E A I E L L K K E T E K L D G E I E D L (60)
MN + + + L L+ + +L+ K E+ ++
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L I E I
MGV-GENOME-0305212_CDS_0071 M D S A A G G K L D F E K A F -E --E E (81)
+ G++
AcrIE6 L E E Q Y P G H A A D L -S I K N L C -P
MGV-GENOME-0305212_CDS_0071 2 AcrIE1 0.86 View Alignment MGV-GENOME-0305212_CDS_0071 M -N ----I H K S I L ----E --------L S S -K A K M Q Q T V A S A L K -I L D E ---Y E -F Q S -A -(60)
M + ++ L A + ++ + + D
AcrIE1 M E K K L S D A Q V A L V A A W R -K Y P D L R E S L E -E A A S I L S L I V F Q A E T L S D Q A N E L A N Y I R R -Q
MGV-GENOME-0305212_CDS_0071 N -I T E A I E L L K K E T E K L D G E I E D L M D S A A -G -G -K L D F E K A F -E E -E (107)
E +E + + + ++ + A + +
AcrIE1 -G -L E E A E G A C R N I D I M R A K W V E V C G E V N Q -H -G I R V Y G D A I D R D V D
MGV-GENOME-0305212_CDS_0071 3 AcrIF2-IC2 0.81 View Alignment MGV-GENOME-0305212_CDS_0071 M -N --------I H K S I L E -L S S ----K ----A K M Q Q --T V A -S A L -K -I L D E Y E F -Q S A -(60)
M + HK + + D
AcrIF2-IC2 M A T K T A Q M I A Q Q H K D T V A A C -E A A E A I A I A K D Q V W -D G E G -Y T K -Y -T F D D N -S -V L I -Q
MGV-GENOME-0305212_CDS_0071 -N I T ----E A I E L L K K E T E K -L D -G E -I -E -D L M -D S A A G G K L D F -E K A F -E E E (114)
A E E E
AcrIF2-IC2 S -G -T T Q Y A M D A D D A D S I K G Y -A D -W L -D -D -E A R S A E A S E I E R L L E -S V E E -E
MGV-GENOME-0305212_CDS_0071 4 AcrIIA19 0.81 View Alignment MGV-GENOME-0305212_CDS_0071 M N I H -K S ---I L ----E ------------------L ----S -S ----K ------A K -M -Q (60)
M + +
AcrIIA19 M K L I V E V E E T N Y K N L V N Y T K L T N E S H N I L V N R L I S E Y I T K P Y -E L R L D L S E R Y S N R D -L -
MGV-GENOME-0305212_CDS_0071 -Q ----T V A ----S A L K I L D E Y -E F Q S A -N I T E A I E L L K K E T E K L -D G -E -I -E -D -L M D (120)
++ AL + E E E+ L D
AcrIIA19 I -E F K F M L I E Y C K E A L Q D I K E L A N S -D -E A -Y E T D E A F E A V F R Q L F -E E -V -I -S -N -P D
MGV-GENOME-0305212_CDS_0071 S A A G G K -L -D F E K A F -E E E (139)
+++ E
AcrIIA19 T V L K A -F -H S Y T S F L E E N K
MGV-GENOME-0305212_CDS_0071 5 AcrIIA34 0.81 View Alignment MGV-GENOME-0305212_CDS_0071 M N -I H ---K S I L -E ---L S S ----K ----------A K M Q Q T V A S -A L -K I L D E ---Y E F Q (60)
M I K+I S ++ L +D +
AcrIIA34 M K N I A N E I K T I R Y A F E D G R S T Q K S I M R K I K A L T D Q F E T M D D L I D S -L N S Y A D T H Y T W A I T
MGV-GENOME-0305212_CDS_0071 S A N I T E A I E -L L K K E T E K L D G E I E D L M D -S A -A G G ----K -L ---------------D F E (120)
++ +I + DL + + G + D
AcrIIA34 Y F Q L A R I I I S F -Q A S N N T T S E K K I D L Q S G P I E V N G K L K I R V T V D E F M A D L A N W E H L E D I K
MGV-GENOME-0305212_CDS_0071 K A F -E E E (127)
K+ E
AcrIIA34 K L A K E L A
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;