3D Structure for MGV-GENOME-0305212_CDS_0071 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 87.09 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0305212_CDS_0071 1 AcrIE1 0.69 View Alignment MGV-GENOME-0305212_CDS_0071 M -N ----I H K S I L ----E --------L S S -K A K M Q Q T V A S A L K -I L D E ---Y E -F Q S -A -(60)
M + ++ L A + ++ + + D
AcrIE1 M E K K L S D A Q V A L V A A W R -K Y P D L R E S L E -E A A S I L S L I V F Q A E T L S D Q A N E L A N Y I R R -Q
MGV-GENOME-0305212_CDS_0071 N -I T E A I E L L K K E T E K L D G E I E D L M D S A A -G -G -K L D F E K A F -E E -E (107)
E +E + + + ++ + A + +
AcrIE1 -G -L E E A E G A C R N I D I M R A K W V E V C G E V N Q -H -G I R V Y G D A I D R D V D
MGV-GENOME-0305212_CDS_0071 2 AcrIE6 0.68 View Alignment MGV-GENOME-0305212_CDS_0071 M N I -H K S I L E -L S S K A K M Q Q T V A S A L K I L D E Y E F Q S A N I T E A I E L L K K E T E K L D G E I E D L (60)
MN + + + L L+ + +L+ K E+ ++
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L I E I
MGV-GENOME-0305212_CDS_0071 M D S A A G G K L D F E K A F -E --E E (81)
+ G++
AcrIE6 L E E Q Y P G H A A D L -S I K N L C -P
MGV-GENOME-0305212_CDS_0071 3 AcrIC3 0.58 View Alignment MGV-GENOME-0305212_CDS_0071 M N ---------------I H K S I L E -L S S -----K A K M -Q Q -T V A -S A L -K I L --D -E Y E -(60)
M+ S++ K + S +
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V V A S S -G Q V K F M A D K -T -D R G -L E S R -F L V P E A -G N R R I
MGV-GENOME-0305212_CDS_0071 F ---Q S A N I T E A I E L L K K E -T E -K L D G E I E D L M D S A A G G K L D F E K A F E E E (110)
+ + A L E + + ++ KA E
AcrIC3 E V A L T G R D L E A A N A L F -S E L A -A -S V E A T N E M Y R E L D A E R A Q I N K A L E -G
MGV-GENOME-0305212_CDS_0071 4 AcrIF23 0.56 View Alignment MGV-GENOME-0305212_CDS_0071 M N I H K -S I L E L S S ---------------K A K ---------M ----------Q Q -------(60)
M+ + +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F G
MGV-GENOME-0305212_CDS_0071 -------------------------------T V -A -S A L -K I L D E Y E F Q S A N I T E A I E L L (120)
+L F N ++ + +
AcrIF23 G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M -A -C D P -S G L L T A A K F W I E N R N D S A Q E I
MGV-GENOME-0305212_CDS_0071 K K E T E K L D G -E I E -D L -M -D -S -A -A G G K L --------D F E K A F E E --E (169)
+ A G + + +
AcrIF23 A G F V M Q Q -K A L L -A Q -H -R -S -A -K A A G Q A D K V A K I A A E Y N A L T A R W G F
MGV-GENOME-0305212_CDS_0071 5 AcrIIC4 0.56 View Alignment MGV-GENOME-0305212_CDS_0071 M N -I H K S I L E ---------L S S K A -K M Q Q T V A S A L K I L D E Y -E F Q S A N I -T E A I E L L K K E (60)
M + + LS + + K + E K
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E P I K G L F K S A V E Q F S S A R D F -F K N -E N Y S K E L
MGV-GENOME-0305212_CDS_0071 T E -K -L D G E I E D L M D S A A G G K L -D F E K A -F -E E E (94)
E + ++ + + EK
AcrIIC4 A E K -F N K E A V N E A V E K L Q K A I -D L A E K -Q -G I Q F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;