3D Structure for MGV-GENOME-0304107_CDS_0081 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 94.65 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0304107_CDS_0081 1 AcrIIA7 0.75 View Alignment MGV-GENOME-0304107_CDS_0081 M K T L D E K A A E Y A A G V V A E F P E L A S Y K G T I E T I Y G Q G A M E C E L L G E E T G T F G Q A L -E S L K -(60)
M T + SLK
AcrIIA7 M -T F G Q A -L ---------------------------------------------E -S L K R
MGV-GENOME-0304107_CDS_0081 R -G H L V T R K G W N G K G M F I F M R P E D C L S T E K V V N H V K S L P E S F K K W I A N N Y G D S E I D K I K F (120)
HLV RKGWNGKGMFIFMRPED L T +VN VKSLPESFK+W+ANN GDSE D+IKF
AcrIIA7 -G -H L V A R K G W N G K G M F I F M R P E D S L P T N M I V N Q V K S L P E S F K R W V A N N H G D S E T D R I K F
MGV-GENOME-0304107_CDS_0081 T A Y L C M K A A D D T V V N G W L A S Q T D M L A N D W V I V E (153)
TAYLCMKAAD T+VNGWLASQTDMLANDWVIVE
AcrIIA7 T A Y L C M K A A D G T I V N G W L A S Q T D M L A N D W V I V E
MGV-GENOME-0304107_CDS_0081 2 AcrIIA12 0.49 View Alignment MGV-GENOME-0304107_CDS_0081 M K T L D E K A A E Y A A G V V A E F P E L A S Y K G T I E T I Y G Q G A M E C E L -L G E E -T G T F G -Q A -L -E (60)
M Y +
AcrIIA12 M S -K T M ----Y K N -----------------------D -----V ----I -----E -L I -K -
MGV-GENOME-0304107_CDS_0081 S -L K R G H L V T R -K G W -N -G -K G M F I F M R P E D C L S T E K V V N H V K S L P E S F K K W I A N N Y -G D (120)
+ + N F PE V Y
AcrIIA12 N A K T N N E E L L F T S V E R N T R E A A T Q Y F R C P E K H -----V S D A G V -----------Y -Y G E -
MGV-GENOME-0304107_CDS_0081 S E I D K I K F T A Y L C M K A -A D D T V V N G W -L A -S Q -T D M L A N D W V I V E (165)
F + + + D +
AcrIIA12 D ----F E F D G -F E I --F -E ----D D -L -I Y T R S --Y ---D K E E L N
MGV-GENOME-0304107_CDS_0081 3 AcrIC1 0.49 View Alignment MGV-GENOME-0304107_CDS_0081 M K T L D E K A A E Y A A G V V A E F P E L A S ---Y K G -T -I -E T I Y G Q G A -------------M E C E (60)
M +L A + ++ + +
AcrIC1 M N N L K K T A -I T ---H ---D G -V F A Y K N -T E T -V -I G S V G R N D I V M A I D A T H G E F N D K N F I
MGV-GENOME-0304107_CDS_0081 L L -------------------G ----E ---------------E ----T G T F G -Q -A L -E S (120)
+ + E +
AcrIC1 I -Y A D T N G N P I Y L G Y A Y L D D N N D A H I D L A V G A C N E D D D F D E K E I H E M I A E Q M E -L -A K R -
MGV-GENOME-0304107_CDS_0081 -L -K R -G H L V T R K G W N G K G M F I F M R P E D C L S T E K V V N H V K -S L P E -S F K K W I A N N Y G D S E (180)
G V + + + + +++
AcrIC1 Y -Q E -L G D T V ------H G T T R L A F D D D G Y M T V R L D Q ----Q -A Y P D ----Y R P ----E N D
MGV-GENOME-0304107_CDS_0081 I D K I K F T A Y L C -M K A A D D T -V V N G W -L ----A ---S -Q T -D M L A N D W V I V E (231)
DK A + W + + +A DW
AcrIC1 -D K H I M W R A -L A -L T A T G K E L E V F W L V E D Y E D E E V N S W -D F D I A D D W R E -L
MGV-GENOME-0304107_CDS_0081 4 AcrIIA16 0.49 View Alignment MGV-GENOME-0304107_CDS_0081 M K T L D E K A A ----E Y A A G V V A E F --P E L A -S Y K G T I E T I Y G Q G A M E C -E L L G E E T G T F G Q (60)
M + K + + + L+
AcrIIA16 M G Y I G T K R S E R S Q D A I E D Y E V P L N H ----F ---------------N K D -L I Q A F I D E N E A
MGV-GENOME-0304107_CDS_0081 A L E S -L K R --G -H L V T R K G W -N G K -G M F I F M R ----P -E D C L S T E K V V ----N H V K S L P E (120)
K +L G D S EKV+ + E
AcrIIA16 Y D T -L -K T K K -V R L W K F V A P R A G A T S W H H T G T Y Y N K -T -D H Y S L E K V A D E L L Q N G D E W E E
MGV-GENOME-0304107_CDS_0081 S F -K K W I A N N Y G D S E I D K I K F T -A Y L C M K A A ----D D -T -V V N G W -----L ---------(180)
+ K + + F + + + +V
AcrIIA16 Q -F K A Y V K E E Q E -T A T S E P V F L S V -I K V Q I W G G S M K R P -K L V G H E V V M G V K K E G W L H A V S
MGV-GENOME-0304107_CDS_0081 -------A -------S -Q T -----D M ----L ---A --------N ---D W V I -V E (234)
Q D
AcrIIA16 K A T Q S K Y K L S A N K V E -M Q K H Y S L E D -Y S A L -T K D F P E F K A Q K R A I N K K M K E M Y N
MGV-GENOME-0304107_CDS_0081 5 AcrIF13 0.49 View Alignment MGV-GENOME-0304107_CDS_0081 M K T L D E -K A A E Y A A G V V A E F P E L A S Y K G T I E T I Y G Q G A M E C E L L G E E T G T F G Q A L E S L K -(60)
MK L K+ A
AcrIF13 M K L L -N I K I ------N ---E ---------------F -A V T A -N --T -E -----------A
MGV-GENOME-0304107_CDS_0081 R G H L V T R -K G W N G K G M F -I F M R P E D C -L S T E K V V N H V K S L -P E -S F -K K W I A N N Y G D S -E (120)
G + + I P + V
AcrIF13 -G D E L Y L Q L P H T P D S Q H S I N H E P ---L -D D D D F V K ----E V Q -E -I C D E -Y F G K G D R -T -
MGV-GENOME-0304107_CDS_0081 I D K I K ---F T A Y L C M K A A -------D -D -T V V N G W L A S -Q --T D M L A -N -D -W V I V E (177)
+ ++ +AY + V A + +
AcrIF13 L A R L S Y A G G Q A Y D S Y T E E D G V Y T T N -T G D Q F V E H S Y A D Y Y N V E V ---Y -C -K -A D L V
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;