3D Structure for MGV-GENOME-0300047_CDS_0078 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 92.05 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0300047_CDS_0078 1 AcrIE6 0.71 View Alignment MGV-GENOME-0300047_CDS_0078 M K I T A H S A L E H L L Y D A I V Q T N K E K R D F A D A Q R N F Y N S -D K S -H I T E -K A T H -L -K D A K -E (60)
M + +LE + + K + +
AcrIE6 M -N N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I -L -S P M Y T -A V M -V T Y -D L I -G -K Q L A -
MGV-GENOME-0300047_CDS_0078 -R -F -E A -A -S I -R L Y E L L T A Q -K V I K E L E -K K -G I E V (98)
I L E ++ K +
AcrIE6 S -R -R A -E -L -I E I L E E Q Y -P G H -A A D L S -I K -N -L C P
MGV-GENOME-0300047_CDS_0078 2 AcrIE1 0.68 View Alignment MGV-GENOME-0300047_CDS_0078 M K --I -T A H S ---A ---L -------E H -L L Y D -A I V -Q T N K E K R -D F -A D A Q R -N F Y N S D (60)
M + A A + +
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E E -A A S I -L S L I V F -Q A E T -L S D -Q A N E L A N Y I R
MGV-GENOME-0300047_CDS_0078 K S H I T E K A T -H L K D A -K E -R -F -E -A -A -S I -R L Y E L L T A Q K V I -K E -L E K K -G -I -E -V (120)
++ + E + + E+ + + +
AcrIE1 R Q G L E E A E -G A C -R N I -D I -M -R -A -K -W -V E V C G E V N Q ---H G I R -V Y G D -A -I D R D V D
MGV-GENOME-0300047_CDS_0078 3 AcrIIC4 0.62 View Alignment MGV-GENOME-0300047_CDS_0078 M K I T A H S --------A ------L E H L -L -Y -D A I V Q T N K E K R D F A D A Q R N F Y N S D K S H I T (60)
MKIT + L + + F A F N +
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H -R -E P I K G L F K S A V E Q F S S A R D F F K N -E N Y ---
MGV-GENOME-0300047_CDS_0078 E K A T H L -K D A K E R F E -A A S -I -R -L -Y E L L T A Q K V I K E L E K K G I E V (106)
A A L K+I +EK GI
AcrIIC4 ----S -K E L A E K F N K E -A V N -E -A -V E K L Q ---K A I D L A E K Q G I Q F
MGV-GENOME-0300047_CDS_0078 4 AcrIC3 0.59 View Alignment MGV-GENOME-0300047_CDS_0078 M K I T A H S A L E ------H L L Y ----------D A I -V -Q T -N K E K ---R -D F -A D A Q -R N F Y (60)
M I++ S L + T R
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V V A S S G Q V K F M A D -K -T D R G -L E S R F L V -P E A G -N R R I E
MGV-GENOME-0300047_CDS_0078 N S -D K S H I T E K A T H L K D A K E R F E A A S I R L Y E L L T A Q K V I -K E L E K K G I -E V (111)
+ ++ EA + EL + K +
AcrIC3 V A L T G R D L E A A N A L F S E L A A S V E A T N E M Y R E L D A E R ---A -Q I N K -A L E -G
MGV-GENOME-0300047_CDS_0078 5 AcrIF23 0.57 View Alignment MGV-GENOME-0300047_CDS_0078 M K I --T A H S ---A -L -E ------H --------L L Y -------------------------(60)
M T
AcrIF23 M T N F Q T W L D S A D -I P V Q Q N G Q W I D L E T G I A Y D P S -Y N Y A A N T R R A S L S P R G I D A R A V A K T
MGV-GENOME-0300047_CDS_0078 -------------D A -I -V -Q T N K E K R D F A D ----A -Q -R -N F Y N S D K S H I T E K A T H L K D (120)
+ + + + + D
AcrIF23 F G G R A L T G T A R Q K E W A -E -K I R A E K V Q Q M N Q D Q A E -M -A -C D -P S G L L T A A K F W I E N R N D
MGV-GENOME-0300047_CDS_0078 A K E R F E A ---A S I R L Y -E L -L -T -A -Q -K V I -----K E ----L -E -K K -G I -E --V (176)
+ L +
AcrIF23 S A Q E I A G F V M Q Q K A L L A -Q H -R -S -A -K A A G Q A D K V A K I A A E -Y -N A -L -T A R W G F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;