3D Structure for MGV-GENOME-0297693_CDS_0017 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 94.57 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0297693_CDS_0017 1 AcrIE6 0.73 View Alignment MGV-GENOME-0297693_CDS_0017 M T Q V Y I -Y A E M G I S E Q I E K I N S E M G E I E F C R A L N R S T E E Q E E K Y K E L S G W L V D W K K R L A S (60)
M++ +E I + + +L+ Y + L+ + L+
AcrIE6 M N N D -T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L I E
MGV-GENOME-0297693_CDS_0017 L K -V S A K ---E N --N I -R L -F (81)
+ + +I L
AcrIE6 I L E E Q Y P G H A -A D L S I K N L C P
MGV-GENOME-0297693_CDS_0017 2 AcrIE1 0.59 View Alignment MGV-GENOME-0297693_CDS_0017 M T ---Q V -Y I Y A E -M -----------------G -I -S ----E Q I E K I N S E M G E I E F C R -A (60)
M + A Q+E ++ E+
AcrIE1 M E K K L S D A -Q V A L V A A W R K Y P D L R E S L E E A A S -I -L -S L I V F Q A E T L S D Q A N E L A N Y I R R
MGV-GENOME-0297693_CDS_0017 L N R S T -E -E Q E -E -K Y K E L S G W L V D W K K R L A S L K V S A K E N ----N -I -R L -F (112)
E + + + W + R
AcrIE1 Q ---G L -E E A -E -G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A -I -D R D V D
MGV-GENOME-0297693_CDS_0017 3 AcrIIC4 0.59 View Alignment MGV-GENOME-0297693_CDS_0017 M T Q --V -Y I -Y -A E ------M -------G I S E -Q I E K I N S E M G E I E F C R A L N R S T E E Q E E (60)
M E S R ++ + E
AcrIIC4 M K I T S S N -F A -T -I A T S E N F A K L S V L P K N H R E P I K G L F K S A V E Q F S S A R D F F K N E N Y S K E
MGV-GENOME-0297693_CDS_0017 K Y K -E -L -S G W L V D W K K R L A S L K V S A K E N N I R L F (94)
+ + +L + A + I F
AcrIIC4 L A E K -F -N K E A V N E A V E K L Q K A I D L A E K Q G I Q -F
MGV-GENOME-0297693_CDS_0017 4 AcrIF23 0.57 View Alignment MGV-GENOME-0297693_CDS_0017 M T Q --V -Y I -Y ---A E --------M -----G I S ---------------------------(60)
MT+
AcrIF23 M T N F Q T W L -D S A D I P V Q Q N G Q W I D L E T G I A ---Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A
MGV-GENOME-0297693_CDS_0017 -------------------E Q ------------I E ----K I N -S E M G E I E F C R A L N R --- (120)
+ F
AcrIF23 K T F G G R A L T G T A R Q K E W A E K -I R A E K V Q Q M N Q D Q A E M A C D P -S G L L T A A K F W I E N R N D S A
MGV-GENOME-0297693_CDS_0017 -S T E E Q E E K Y K E L S G W L V ----D W K -K -R L -A -S L K V S A K E N N I R -L -F (169)
K L + + + F
AcrIF23 Q E I A G F V M Q Q K A L L A Q H R S A K A A G Q A -D K -V -A K I A A E Y N A L -T A R W G F
MGV-GENOME-0297693_CDS_0017 5 AcrIC3 0.53 View Alignment MGV-GENOME-0297693_CDS_0017 M T Q V Y I -Y A E ------M ----G I S ----E ---Q I E ----------K I N S -E M G E -I E F C R (60)
M+ ++ + I
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V -V A S S G Q V K F M A D K T D R G L E S R F L V P E A -G N R R I -E V A
MGV-GENOME-0297693_CDS_0017 A L N R S T E E Q E E K Y K E L S G W L V D W K K R L A S L K V S A K E N N I R L -F (103)
+ R E EL + L + N L
AcrIC3 L T G R D L E A A N A L F S E L A A S V E A T N E M Y R E L D A E R A Q I N K A L E G
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;