3D Structure for MGV-GENOME-0294890_CDS_0077 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 93.01 ;
Download
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0294890_CDS_0077 1 AcrIIA31 0.79 View Alignment MGV-GENOME-0294890_CDS_0077 M V T E E Q L K E A L I D L Y E S E F K D E Q T F E E F A D M L D F W I D K D D R I L I E G R G M K P I D G I K E V G H (60)
MVTEEQLKE+L+ +YE+E KDEQTFEE AD DFWIDKD ILIEGRGMKPIDG+ VGH
AcrIIA31 M V T E E Q L K E V L V G I Y E T E Y K D E Q T F E E Y A D G W D F W I D K D G D I L I E G R G M K P I D G V Q K V G H
MGV-GENOME-0294890_CDS_0077 V D K G V I Y A Y (69)
VD GVIYAY
AcrIIA31 V D N G V I Y A Y
MGV-GENOME-0294890_CDS_0077 2 AcrIC4 0.55 View Alignment MGV-GENOME-0294890_CDS_0077 M V T E E Q L K E A L I D L Y E S E F K D E Q T -F -E -E -F -A -D M L D F W I D K D D R -I L I -E G R -G -M K (60)
M + + +D D + G
AcrIC4 M D N -K I T P A D E E ----------K -I -R -E -W -L -N -C E E A S V D N D G D V W V -A V P M T G H W L
MGV-GENOME-0294890_CDS_0077 P I D G I K E V G H V D K G V I Y A -Y (80)
+ G
AcrIC4 S D E Q K A K Y I E W R -G ---D E T
MGV-GENOME-0294890_CDS_0077 3 AcrIIA2 0.53 View Alignment MGV-GENOME-0294890_CDS_0077 M V T ---E -E ---Q L K E A L I D L Y E S E F K D E -Q T F E E F A D M L D F W -I D K D -D R I L I E G --R -(60)
M + I + E + D I K +++
AcrIIA2 M T L T R A -Q K K Y A E A M H E F I N M V D D F E E S T P D F A K E V L H D S D Y V V I T K N E K Y A V A L C S L S T
MGV-GENOME-0294890_CDS_0077 -------------G --------------------M K P I D G I K E V G H V ------D -K G V -- (120)
ID + +
AcrIIA2 D E C E Y D T N L Y L D E K L V D Y S T V D V N G V T Y Y I N I V E T N D I D D L E I -A T D E D E M K S G N Q E I I L
MGV-GENOME-0294890_CDS_0077 ---I Y A Y (127)
AcrIIA2 K S E -L -K
MGV-GENOME-0294890_CDS_0077 4 AcrIC5 0.52 View Alignment MGV-GENOME-0294890_CDS_0077 M V T E E -Q L -----K E A L I D -L Y E S E F K D E Q T F E E F A D M L D F W -I D K -D D R I -L I -E G R G M (60)
M +A++ EE ++ D +
AcrIC5 M S K -V T L N G Q Q I D F D A A V N L -M ---D A --E L R E E L H S A Q E W T N D Q E F L D A -Y -V Q A ----
MGV-GENOME-0294890_CDS_0077 K P I D G I K E -V -G -H -V D K G V I Y A Y (84)
D +
AcrIC5 --------H -A -A -K F D G E E F Q V A
MGV-GENOME-0294890_CDS_0077 5 AcrIE8 0.51 View Alignment MGV-GENOME-0294890_CDS_0077 M V -T E E Q L K E A L I D L Y E -S E --F K D E Q T F E E F A D M L D F W I D K D D R -I L I E G R G M K P I D G I (60)
M + D E EF ++ + + + +
AcrIE8 M T T I T I N -T --Y -D -P E A --R F N M S G E E A K E F F A F V E E Q A K V S G F D V Y Y D S -C T Y V D E --
MGV-GENOME-0294890_CDS_0077 K E V -G H V D K G V I Y A Y (75)
+ Y
AcrIE8 E -S E -R F V E K C F Q N Y
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;