3D Structure for MGV-GENOME-0293645_CDS_0054 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 96.01 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0293645_CDS_0054 1 AcrIE6 0.75 View Alignment MGV-GENOME-0293645_CDS_0054 M N T A E R D R L A K E L D D L R S R F E R L E C F L F ----S D R -F -Y -S -L -S A R H Q T L L L A Q R F F M D (60)
MN + + L + + L L L+ Q
AcrIE6 M N -N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M -Y -T -A -V M -V T Y D L I G K Q L A S R R
MGV-GENOME-0293645_CDS_0054 -A Y -A K I L ---R -E R L ----E --C -V -Q (88)
+ IL ++ +
AcrIE6 A E -L I E I L E E Q Y P G H A A D L S -I K -N L C P
MGV-GENOME-0293645_CDS_0054 2 AcrIIC4 0.63 View Alignment MGV-GENOME-0293645_CDS_0054 M N -T -A E R D R ------------L A K -E ----L ----D -D L R S R F E R L E C F L F S D R F Y S -L (60)
M T L K + + F + F ++ L
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N -H R E P I K G L F -K S A V E Q F S S A R D F F K N E N Y S K E L
MGV-GENOME-0293645_CDS_0054 S A R H Q -T L L L A Q R F F M D A Y A K I L R E R L E C V Q (91)
+ + ++ + ++
AcrIIC4 A E K F N K E A V N E A V E K L Q K A I D L A E K Q G I Q -F
MGV-GENOME-0293645_CDS_0054 3 AcrIE1 0.60 View Alignment MGV-GENOME-0293645_CDS_0054 M N --T -A E R D R L A ----------K E -----L ----D -----D L R S R ----F E R L E C F L F S (60)
M L+ L +
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E -S L E E A -A S I L -S L I V F -Q A E T L S D Q A N E L A N Y I R R
MGV-GENOME-0293645_CDS_0054 D R F Y S ---L S -A R H Q T L L L A Q R F F M D ----A Y A K I -L -R -E R -L -E -C V -Q (111)
R + A +
AcrIE1 -Q G L E E A E G A C -R N I D I M R A K W V E V C G E V N Q H G I R V -Y -G D -A -I -D R D V D
MGV-GENOME-0293645_CDS_0054 4 AcrIF23 0.59 View Alignment MGV-GENOME-0293645_CDS_0054 M -N T -A E R D R ---L A ---K ------------E L D --------------------------(60)
M N D +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F G
MGV-GENOME-0293645_CDS_0054 -----------D -L -R -S -R F E R L E C F L F --------S D R ---F Y S ----------L -S - (120)
+ D +
AcrIF23 G R A L T G T A R Q K E W -A -E -K I R A E K V Q Q M -N Q D Q A E M A C D -P S G L L T A A K F W I E N R N D S -A
MGV-GENOME-0293645_CDS_0054 A -R -H Q T -L L L A Q R ----F F M D ---------A Y A K I L R E R L E -C ---V --Q (171)
+ Q + +
AcrIF23 -Q -E -I A G -F V M Q Q K A L L A Q H -R S A K A A G Q A D K V A K I A A E Y N A L T A R -W G F
MGV-GENOME-0293645_CDS_0054 5 AcrIC3 0.54 View Alignment MGV-GENOME-0293645_CDS_0054 M N T A E R D ---R ---L A ----K -E -L ----D ----D L R S -R F E R L E C F L -F ----------(60)
M+ R L LE
AcrIC3 M S I Q V T S T N G R T V N L E I E L G -S -V -V A S S -G Q V K F M A D K T D R G L E S R -F -L V P E A G N R R I
MGV-GENOME-0293645_CDS_0054 -----S -D -R F -Y S -L ---S A R H Q T L L L A Q R F F M D -A Y -A -K -I -L -R -E R -L E C V -Q (118)
+ + A+ +
AcrIC3 E V A L T -G -R -D L E -A A N A L F S E L A A S V E A T N E M Y -R E -L -D -A -E -R -A Q -I N K A L E G
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;