3D Structure for MGV-GENOME-0292342_CDS_0019 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 88.22 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0292342_CDS_0019 1 AcrIE6 0.74 View Alignment MGV-GENOME-0292342_CDS_0019 M Q V M K G T K R E -I T L -F -Q -W S -E V -L A K A E K -S L A E S E K C Y K L Y G -D ---E D S K K W I E E D (60)
M+ + L + + + +
AcrIE6 M N -N --D T --E V -L E -Q -Q -I K -A F E -L L A D E L K D -R L P T L E I --L S P M Y T A V M V T Y D L I
MGV-GENOME-0292342_CDS_0019 T A K V N K I K Q Q I K -E V ---I E F -M -D -K H G -I ---E (95)
+ + + +
AcrIE6 G K Q L A S R R A E L I E I L E E Q Y P G H -A -A D L S I K N L C P
MGV-GENOME-0292342_CDS_0019 2 AcrIE1 0.63 View Alignment MGV-GENOME-0292342_CDS_0019 M Q -V M K G -T ----K -------R ---E -I -T L -F Q W S E V L A K A E K -S L ---A E S E K C Y K L Y (60)
M + S ++ E +
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E -E A -A S I L S L I V F Q -A E T L S D Q A N E L A N Y I R R Q
MGV-GENOME-0292342_CDS_0019 G D E D S K K W I -E E D -T A -K V N K I K Q Q I K -E -V -I E -F M D K H -G -----I --E (111)
+ + K + +
AcrIE1 -G L E E A E G A C -R N I -D I M R A K W V E V C -G -E -V N -Q H G I R -V Y G D A I D R D V D
MGV-GENOME-0292342_CDS_0019 3 AcrIIC4 0.62 View Alignment MGV-GENOME-0292342_CDS_0019 M Q V M K G T K R -E -------I -------T L F Q W S E V L A K A E K S L A E S E K C Y K L Y G D E D S K K W (60)
M + + + A + K + SK
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E P I K G L F K S A V E Q F S S A R D F F K N --E N Y S K E L
MGV-GENOME-0292342_CDS_0019 I E -E D -T A K V N K I K Q Q I K E V I E F M D K H G I -E (91)
+E VN + + +I+ +K GI
AcrIIC4 A E K F -N K E A V N E A V E K L Q K A I D L A E K Q G I Q F
MGV-GENOME-0292342_CDS_0019 4 AcrIF23 0.59 View Alignment MGV-GENOME-0292342_CDS_0019 M Q V M ---K G T -K ---------------------R --------------E I ----------(60)
M+ + I
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F G
MGV-GENOME-0292342_CDS_0019 -----------------------T L F -Q W S -E -V -L A K -A E K S L A E S E K C Y K L Y G D E D S K (120)
+ + A L+ K DS
AcrIF23 G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q -D Q A -E -M -A C D -P S G L L T A A K F W I E N R N -D S A
MGV-GENOME-0292342_CDS_0019 K W I E E D T A K V N K I K Q Q I K ------------E V I E F M D K H G I ---E (165)
I + Q + ++ +
AcrIF23 Q E I A G F V M Q Q K A L L A Q H R S A K A A G Q A D K V A K I A A E Y N A L T A R W G F
MGV-GENOME-0292342_CDS_0019 5 AcrIC3 0.57 View Alignment MGV-GENOME-0292342_CDS_0019 M -Q V M K G -T --------K -------------------R E I ---------------T L F Q W (60)
M + R +
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V V A S S G Q V K F M A D K T D R G -L E S R F L V P E A G N R R I E V A L T
MGV-GENOME-0292342_CDS_0019 S E V L A K A E K S L A E S E K C Y K L Y G D E D S K K W I -E E D T A K V N -K I K Q Q I K E V I E F M D K H G I E (119)
L A E A + K
AcrIC3 G R D L E A A N A L F S E L A A S V ------------E ----A T N -E -M Y R E L D A E R A Q I N K A L E G
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;