3D Structure for MGV-GENOME-0292122_CDS_0061 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 93.70 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0292122_CDS_0061 1 AcrIE6 0.73 View Alignment MGV-GENOME-0292122_CDS_0061 M K F T F E E W K F I Q H C I E C A G R E F E K M M L D S T -P --S D -K E T S C Y Q I F ----K R Q T E K A N A L (60)
M E + E + E Y + + +
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L I E I
MGV-GENOME-0292122_CDS_0061 V E K I ----K -G ---S --E -I (80)
+E
AcrIE6 L E E Q Y P G H A A D L S I -K N L C P
MGV-GENOME-0292122_CDS_0061 2 AcrIIC4 0.67 View Alignment MGV-GENOME-0292122_CDS_0061 M K F T F E E W K F ------------I Q --------H -C -I E C A G R E F E K M M L ---D -S T ---P (60)
MK T + + A F +
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E P I K -G -L F K S A V E Q F S S A R D F F K -N E N Y S K E
MGV-GENOME-0292122_CDS_0061 ---S D K E T -S C Y Q I F K R Q T E K A N A L V E K I K G S -E I (95)
+ KA L+EK
AcrIIC4 L A E K F -N K E -A V N E A V E K L Q K A I D L A E K Q G I -Q -F
MGV-GENOME-0292122_CDS_0061 3 AcrIE1 0.62 View Alignment MGV-GENOME-0292122_CDS_0061 M -K F ---T F E E W ----K F --------I -Q -------H ----C I E ----C A G R E F E K M M L D (60)
M K + + E
AcrIE1 M E K K L S D A Q V A L V A A W R -K Y P D L R E S -L -E E A A S I L S L I V F Q A -E T L S D Q A N E L A N Y I R R
MGV-GENOME-0292122_CDS_0061 S T P S D K E ---T S C Y Q I F K R Q T E K A -N A ---L V E K I K ----G S --E I (106)
+ + I + + ++
AcrIE1 Q G L -E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I D -R D V D
MGV-GENOME-0292122_CDS_0061 4 AcrIF23 0.59 View Alignment MGV-GENOME-0292122_CDS_0061 M K F ---T -F E -E --------W K -F ---I Q -------------------------------(60)
M +
AcrIF23 M T N F Q T W L D -S -A D I P V Q Q N G -Q -W I D L -E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V
MGV-GENOME-0292122_CDS_0061 -----------------------H C I E C A G R E F E K -M M L ----D -----------S T P S D (120)
M + + S
AcrIF23 A K T F G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M -A C D P S G L L T A A K F W I E N R N D S A
MGV-GENOME-0292122_CDS_0061 K E ----T S C Y Q I F K ----R Q T ------E -K A -N -A L V E K I K G S ---E -I (169)
E + K ++
AcrIF23 Q E I A G F V M Q Q K A L L A Q H R S A -K A A G Q A -D K -V -A K I A A E Y N A L T A R W G F
MGV-GENOME-0292122_CDS_0061 5 AcrIF25 0.57 View Alignment MGV-GENOME-0292122_CDS_0061 M K -------------F T F E E W K F I Q ---------------------------H -C -I -E -(60)
M E
AcrIF25 M D N D D K K P D A L I H L R V P A E V K G R W -V K E S R L E G M K L T D W I T G R V E A K A L S I A -E -V -L -E
MGV-GENOME-0292122_CDS_0061 C A G R E F E K M M L D ------------------------------------------------(120)
A D
AcrIF25 E A A A M A R S L -E D S P I F Y R N K L C A D G I V T I Q Q Q A A R F S A A T D D A T R L D A A L W A R E G Y Q L L S
MGV-GENOME-0292122_CDS_0061 -S T ----P ----S D K E ------T S C -Y ----Q I F K R Q T E K A N A L V E K I K G S -E I (174)
++ S E+ + + +
AcrIF25 S G L P D S Y S G A V P N E G -R T G W V T A S Q M -A R L F G G E A L W I E R C Q Q E L G G A G K E D G R
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;