3D Structure for MGV-GENOME-0291464_CDS_0002 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 84.20 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0291464_CDS_0002 1 AcrIE6 0.74 View Alignment MGV-GENOME-0291464_CDS_0002 M D -E L D Y ---I K N M C -D R Y I S E C E E L S K E P -P N G ---W T A S A A N K S K I K R L G I E L R Q E M I (60)
M + + + E + TA ++ I + + R E I
AcrIE6 M N N D T E V L E Q Q I K A F E -L L A D E L K D R L P T L E I -L S P M Y T A V M V T Y D L I G K Q L A S R R A E L I
MGV-GENOME-0291464_CDS_0002 D L -E R K Y ---Y -V R -G ---G -K (82)
++ E Y
AcrIE6 E I L E E Q Y P G H A A D L S -I K N L C P
MGV-GENOME-0291464_CDS_0002 2 AcrIIC4 0.60 View Alignment MGV-GENOME-0291464_CDS_0002 M -D E L D Y ---I K -N ----------------M ----C D -R Y I S E C E E L S K E P P N G W T A S A A (60)
M I + + + N +
AcrIIC4 M K I T S S N F A T I -A T S E N F A K L S V L P K N H R E P I K G L F -K S A V E Q F S S A R D F F K N E N Y S K E L
MGV-GENOME-0291464_CDS_0002 N K S K I K R L G I E L R Q E M I D L E R K Y Y V R G G -K (90)
K + E+ + G
AcrIIC4 A E K F N K E A V N E A V E K L Q K A I D L A E K Q G I Q F
MGV-GENOME-0291464_CDS_0002 3 AcrIIA28 0.60 View Alignment MGV-GENOME-0291464_CDS_0002 M -D -----E L D Y I K -N M ----C D R Y I S E C E E L S K E ----P -P -N G -W T A S A A N K S K I K R L (60)
M + + + + K
AcrIIA28 M K T I F T K K Q T E E L L N D I S I E K Q K E L F N S M H D F R S Q H A K E A R I P G -W S D K Y N K L E K K M L S D
MGV-GENOME-0291464_CDS_0002 G I E L R -Q E M I D L E R --K -Y Y V R G ----G -K (90)
E+ LE
AcrIIA28 F E E V T G I K Y D T L E S E L -I W D N L S N K F L Y N S
MGV-GENOME-0291464_CDS_0002 4 AcrIF23 0.59 View Alignment MGV-GENOME-0291464_CDS_0002 M D -E L D Y I K N -------M C D ----------------------------------------(60)
M + +
AcrIF23 M T N F Q T W L D S A D I P V Q Q -N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F
MGV-GENOME-0291464_CDS_0002 -----------------------R -Y -I S -E -C -E -E -L -S -K -E -P -P N G -W ---T --- (120)
+ +G
AcrIF23 G G R A L T G T A R Q K E W A E K I R A E K V Q Q -M -N Q -D -Q -A -E -M -A -C -D -P -S G L L T A A K F W I
MGV-GENOME-0291464_CDS_0002 ----A S A ----A N K S -K I K -R L G -I -E L R ---------Q -E -M -I D L E R K Y Y V R G -G --K (180)
SA L + + Y +
AcrIF23 E N R N D S A Q E I A G F V -M Q Q -K A L -L -A Q H -R S A K A A G Q A -D -K -V A K I A A E Y N A L T A R W G F
MGV-GENOME-0291464_CDS_0002 5 AcrIE1 0.58 View Alignment MGV-GENOME-0291464_CDS_0002 M -D ---E -L -D -Y -I K -N --------------M -C D -----------R Y I S E C E E L S K E P (60)
M + + EL
AcrIE1 M E K K L S D A -Q -V -A L -V A A W R K Y P D L R E S L E E -A A -S I L S L I V F Q A E T L S D Q A N E L A N Y I
MGV-GENOME-0291464_CDS_0002 P N -G W T A ---S A A N K S K I K R L G I E L R Q E M I D L E R -K -Y -Y V R G --G --K (109)
G N + +E+ E
AcrIE1 R R Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R -V -Y G D A -I D R D V D
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;