3D Structure for MGV-GENOME-0287944_CDS_0004 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 91.83 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0287944_CDS_0004 1 AcrIE6 0.70 View Alignment MGV-GENOME-0287944_CDS_0004 M D E P I I E P T K L T L A E I -A R L V A R R -D E L T T G L P M Y D ----A ----Q Y M Q H A E A ----Y A R (60)
M E ++ L+ + L +Y A
AcrIE6 M -N N D T E V L E Q Q I K A F E -L L A D E L K -D R L P T L E I L S P M Y T -A V M V T Y D L I G K Q L A S R R A E
MGV-GENOME-0287944_CDS_0004 V -M N D L Y D I N -S K -L -K -E V ----G --I (88)
L + ++
AcrIE6 -L I E I L E E Q Y P G -H -A -A D L S I K N -L C P
MGV-GENOME-0287944_CDS_0004 2 AcrIF23 0.60 View Alignment MGV-GENOME-0287944_CDS_0004 M D E -P --I I E ---------P -------------------T K ----------------L --(60)
M + T
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T -R R A S L S P R G I D A R A V A K T F
MGV-GENOME-0287944_CDS_0004 -----------------T L -A E -----------I A R L V A R -R D E L T T G L P M -------Y D (120)
E A +
AcrIF23 G G R A L T G T A R Q K E W A E K I R A -E K V Q Q M N Q D Q A E M A C D P S G L -L T A A K F W I E N R N D S A Q E I
MGV-GENOME-0287944_CDS_0004 A ----Q Y M Q H A E A ---Y -A -R V -M -N D L Y D I N S K L K E V -G ---I (164)
A Q + + I +
AcrIF23 A G F V M Q Q K A L L A Q H R S A K -A A G Q -A D K V A K I A A E Y N A L T A R W G F
MGV-GENOME-0287944_CDS_0004 3 AcrIE1 0.59 View Alignment MGV-GENOME-0287944_CDS_0004 M D E P ---I ---I -E -P -------------T -K L -T -L A -E ----I A R L V A R R D E L T T G L P (60)
M+ + + + L EL + +
AcrIE1 M E K K L S D A Q V A L V -A A W R K Y P D L R E S L E E A A -S I -L -S L -I V F Q A E T L S D Q A N E L A N Y I R
MGV-GENOME-0287944_CDS_0004 M Y D ----A -Q Y M -Q H A E -A -Y A R V M N D L Y D I N -S K L K E V -------G -I (109)
+ + A+ ++ ++ V
AcrIE1 R Q G L E E A E G A C -R N I -D I -M R A K W V E V C G E V -N Q H G I R V Y G D A I D R D V D
MGV-GENOME-0287944_CDS_0004 4 AcrIIC4 0.55 View Alignment MGV-GENOME-0287944_CDS_0004 M D E P --I I E ---P ------T -K -L --------T L A E I A R L V A R R D E L T T G -L P M Y D ----(60)
M +V +
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S -V -L P K N H R E P I K G L F K S A V E Q F S S A R D -F F K N E -N Y S K
MGV-GENOME-0287944_CDS_0004 A --Q Y M Q H A E A Y A R V M N D L Y D I N S K L K E V G --I (93)
EA + L + + G
AcrIIC4 E L A E K -F N K E A V N E A V E K L Q K A I D L A E K Q G I Q F
MGV-GENOME-0287944_CDS_0004 5 AcrIF12 0.54 View Alignment MGV-GENOME-0287944_CDS_0004 M D -E P ---I ---I E P --------------T ----K -L ----T -L -A -E -------I A -R -(60)
M E +E + +
AcrIF12 M A Y E K T W H R D Y A A E -S L K R A E T S R W T Q D A N L E W T -Q -L A L E -C -A -Q -V V H L A R Q V G E -E
MGV-GENOME-0287944_CDS_0004 -----L V A R R D E L T T G ----L P M -Y D ----------A -Q Y -M Q H A E A ----Y -A ----R V (120)
++ D + + Y A + A R
AcrIF12 L G N E K I I G I A D T V L S T I E A H S Q A T Y -R R P C Y K R I T T A Q T -H -L L A V T L L E R -F -G S A R R -
MGV-GENOME-0287944_CDS_0004 -M N D L Y D I N S -K L K E V G I (138)
N + ++ + + +
AcrIF12 V A N A V W Q L T D D E I D Q A K A
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;