3D Structure for MGV-GENOME-0285020_CDS_0073 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold with pLDDT = 87.26 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see: Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0285020_CDS_0073 1 AcrIIC3 0.79 View Alignment MGV-GENOME-0285020_CDS_0073 M F N R V I I F T S F N G F E K V S Q T E K R R L A N I I N S E V S S I N E H L A A K A T I E S -L D G K Y R A F L F N (60)
MF R+IIFTSFNGFEKVS TEKRRLA IIN VS I E L AK T S DG YRAFLFN
AcrIIC3 M F K R A I I F T S F N G F E K V S R T E K R R L A K I I N A R V S I I D E Y L R A K D T N A S L -D G Q Y R A F L F N
MGV-GENOME-0285020_CDS_0073 D E A P A M A E F I E K L K A F A K S S D G I S I S A W E I E E S K Y N S L P L K Q K D F L A T A N G N K I F E A (117)
DE PAM EF+ KLKAFA S GISI AWEIEES Y LP+ +DFLA ANG IF +
AcrIIC3 D E S P A M T E F L A K L K A F A E S C T G I S I D A W E I E E S E Y V R L P V E R R D F L A A A N G K E I F K I
MGV-GENOME-0285020_CDS_0073 2 AcrIF5 0.77 View Alignment MGV-GENOME-0285020_CDS_0073 M F N R V I -I F T S F N G F E K V S Q T E K R R L A N I I N S E V S S I N E H L A A K A T I E S L D G K Y R A F L F -(60)
M + T + + DGK +
AcrIF5 M S R P T V V T V T E T P ---R --------------N -----P ---G S Y E V N V E R D G K M V V G R A R
MGV-GENOME-0285020_CDS_0073 N -D E A P A M -A -E -F I E K L K A F A K S S D G I S I S A W E I E E S K Y N S L P L K Q K D F L A T -A N G N K I (120)
+ A + + + + +
AcrIF5 A G S D P G A A A -A -K A M Q M A M E W ----G S -P N Y V I L G S N K V L A F I -P ---E ----Q -L R -V -
MGV-GENOME-0285020_CDS_0073 F E A (123)
AcrIF5 -K M
MGV-GENOME-0285020_CDS_0073 3 AcrIIA4 0.74 View Alignment MGV-GENOME-0285020_CDS_0073 M F N R V I I F T S F N G F E K V S Q T E -K -R -R L A N I I N S E V S -S I N -E H -L A A K A T I E S L D -G K Y (60)
M E + + + I G
AcrIIA4 M N -I N D -L --I ---R -----E I -K -N -K D Y T V K L S G -T -D -S N -S -I T Q L I I R V N N D G N E
MGV-GENOME-0285020_CDS_0073 R A F L F N D E A P A M -A -E -F -I E K L K A F A K S S D G I -S I S A W E -I -E E S K Y N S L P L K Q K D F L A (120)
+ ++ EK K+ + EE +
AcrIIA4 Y V I S E S E ---N -E -S -I -V -E K F I S A F K N ---G W -N Q E Y -E -D E E E -F Y N D ---M -Q ---
MGV-GENOME-0285020_CDS_0073 -T A -N G N K I F E A (132)
+
AcrIIA4 T I -T L K S -E -L N
MGV-GENOME-0285020_CDS_0073 4 AcrIF1 0.72 View Alignment MGV-GENOME-0285020_CDS_0073 M F N R V I I F T S F N G F E K V S Q T E K R R L A N I I N S E V S S I N E H L A A K A T I E S L D G K Y R A F L F -N (60)
M + S + + + K +A +
AcrIF1 M K -F I K -Y L S T A ------------H ---L --------N -Y -M N I A V Y E N G S K I K A R V E N V
MGV-GENOME-0285020_CDS_0073 --D ------E -A P A M A E F -I E K L -K A F -A -K -S -S D G I S I S A W E I E E S K Y N S L P L K Q K D F (120)
E L + S +
AcrIF1 V N G K S V G A R -D F D S ----T -E Q L E -S W F -Y -G -L ----P -------G S ----G L G R I E N A
MGV-GENOME-0285020_CDS_0073 L A T A N G N K I F E A (132)
++
AcrIF1 M N E I S R R -E -N P
MGV-GENOME-0285020_CDS_0073 5 AcrIF22 0.72 View Alignment MGV-GENOME-0285020_CDS_0073 M F N R V I I F T S F N G F E K V S Q T -E -K R R L A N -I I N S E V S -S -I N -E H L A A K A -T I E S L D G K Y (60)
M + + A I H + A + DG
AcrIF22 M S K K F L E I V --G -N ------A -S --T S A -T F N ---G -K -L I -G -H N V N -A S -A Y E K D G E I
MGV-GENOME-0285020_CDS_0073 R A F L F N D E A P A M A E F I E K -L K A F A K S S D G I S I S A W E I E E S K Y N S L P L K Q K D F L A -----T (120)
+ L + S Y S KQ L
AcrIF22 I I H L E T -N ----------G -----S R --W K S S P E V R M T K E E Y D S F C E K Q S R P L F V R G I E -
MGV-GENOME-0285020_CDS_0073 -A -N G N K I F E A (131)
+
AcrIF22 L -F G A E A L -L S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;