3D Structure for MGV-GENOME-0285020_CDS_0073 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 87.26 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0285020_CDS_0073 1 AcrIIC3 0.75 View Alignment MGV-GENOME-0285020_CDS_0073 M F N R V I I F T S F N G F E K V S Q T E K R R L A N I I N S E V S S I N E H L A A K A T I E S -L D G K Y R A F L F N (60)
MF R+IIFTSFNGFEKVS TEKRRLA IIN VS I E L AK T S DG YRAFLFN
AcrIIC3 M F K R A I I F T S F N G F E K V S R T E K R R L A K I I N A R V S I I D E Y L R A K D T N A S L -D G Q Y R A F L F N
MGV-GENOME-0285020_CDS_0073 D E A P A M A E F I E K L K A F A K S S D G I S I S A W E I E E S K Y N S L P L K Q K D F L A T A N G N K I F E A (117)
DE PAM EF+ KLKAFA S GISI AWEIEES Y LP+ +DFLA ANG IF +
AcrIIC3 D E S P A M T E F L A K L K A F A E S C T G I S I D A W E I E E S E Y V R L P V E R R D F L A A A N G K E I F K I
MGV-GENOME-0285020_CDS_0073 2 AcrVIA1_Lse 0.57 View Alignment MGV-GENOME-0285020_CDS_0073 M -F ------N R V -I I F T -S F N G F E K V S Q T -E -K -R -R L A N ------------I I N S E V S -(60)
M + IF + + L N
AcrVIA1_Lse M I Y Y I K D L K V K G K -I F -E N L -M N K E A V E -G -L -I -T F L K K A E F E I Y S R E N Y S K Y N K W F -E
MGV-GENOME-0285020_CDS_0073 S I N E H L A -A K A T I E S L D G K ---Y R A F L F N -D -E --------------------A P A M A E F (120)
+ + AP E
AcrVIA1_Lse M W K -S P -T S S L V F W K N Y S F R C H L L F V I E K D G E C L G I P A S V F E S V L Q I Y L A D P F A P D T K E L
MGV-GENOME-0285020_CDS_0073 I E K L K A F A K S -S D G I S -I S A W E I E E S K Y N S L ---P L -------------------K Q K D F (180)
+ ++ + +E+EES L D
AcrVIA1_Lse F V E V C N L Y E -C L A D V T V V E H F E A E E S A W H K L T H N E T E V S K R V Y S K D D D E L L K Y I P E F L D T
MGV-GENOME-0285020_CDS_0073 L ----A -----------------T --------------A -N --------------G N K I F (240)
+ + +
AcrVIA1_Lse I A T N K -K S Q K Y N Q I Q G K I Q E I N K E I A T L Y E S S E D Y I F T E Y V S N L Y R E S A K L E Q H S K Q I L K
MGV-GENOME-0285020_CDS_0073 --E A (244)
AcrVIA1_Lse E E L N
MGV-GENOME-0285020_CDS_0073 3 AcrIC7 0.55 View Alignment MGV-GENOME-0285020_CDS_0073 M F N R V I I --F T S F N G F E K V S Q -T E K R -R L A -N -I I -N S E V -S -S I -N -E H L A A K -A T I E S (60)
M + + + + A E + I
AcrIC7 M A T V -T K I T L N G -Q N H Y N F G S E -C S E A -D A E -G Y -R E W I -A -Q -E L -A E N F P G A E I E I N E
MGV-GENOME-0285020_CDS_0073 L D G K Y R A F L F N D E A P A M A E F I E K L K A F A K S S D G I S I S A W E I E E S K Y N S L P L K Q K D F L A T A (120)
+D Y + + D+ + ++
AcrIC7 A D S T Y S V V V E I D D E S Y ----Y D E A R G L K D D V N V ---F C I ----D A W D R -----------C
MGV-GENOME-0285020_CDS_0073 N G N K I F E A (128)
AcrIC7 P W D W --V S
MGV-GENOME-0285020_CDS_0073 4 AcrIF15 0.53 View Alignment MGV-GENOME-0285020_CDS_0073 M F N R V I I -F T S F N G F E K V S Q T E K R R L A N -I I N -S -E -V -S -S I N -E H L A A K A T I E S L D G K (60)
M + S + + ++ G
AcrIF15 M T -T I -T I A -Y E --V ---S -------N -D K V -E -T -I -K -T -M V E -S Q Q I -H N V N F -N G E
MGV-GENOME-0285020_CDS_0073 Y R A F L F N D E A P A M A E F I E K L K A F A K S S D G -I S I S A W E I E E S K Y N S L P L K Q K D F L A T A N -G (120)
+ K E L +
AcrIF15 E F T I E R -G D ---F -------T S I D K ----D --------E -A E ---H V K L ----L N K I -Q -
MGV-GENOME-0285020_CDS_0073 N -K -I F -E A (129)
AcrIF15 D I -I -H G Y S
MGV-GENOME-0285020_CDS_0073 5 AcrIE8 0.51 View Alignment MGV-GENOME-0285020_CDS_0073 M F N R V I I F T S F N G F E K V S Q T E K R R L A N I I N S E V S S I N E H L A A K A T I E S L D G K Y -R A -F L F (60)
M + I ++ D
AcrIE8 M -T T -I T I N T -------------Y -------------------------D -P E A -R F N M -
MGV-GENOME-0285020_CDS_0073 N D E A P A M A E F I E K L K A F A K S S D G -I S -I S A W E I E E S K Y N S L P L -K Q K D F L A T A N G N K I F E (120)
EF + AK S G + + F+
AcrIE8 --S G E E A K E F F A F V E E Q A K V S -G F D V Y Y D S C T Y V D E -------E -S E R F V E K C -F ---Q N
MGV-GENOME-0285020_CDS_0073 A (121)
AcrIE8 Y
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;