3D Structure for MGV-GENOME-0284031_CDS_0059 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 95.52 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0284031_CDS_0059 1 AcrIE6 0.73 View Alignment MGV-GENOME-0284031_CDS_0059 M V A E Y ---I K R M Y K E D T E L S D K I -F -K A E R G L K T L D ----L D K R E K E L L I S Q V Q K M K A Y Q (60)
M + K L D + ++ L L + +L+ Q+ +A
AcrIE6 M -N N D T E V L E Q Q I K A F E L L A D E L K -D R L -P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L
MGV-GENOME-0284031_CDS_0059 E V L -Q A R I K Y A I -E K -G ---K K (82)
+ + +
AcrIE6 I E I L E E Q Y P G H A A D L S I K N L C P
MGV-GENOME-0284031_CDS_0059 2 AcrIE1 0.63 View Alignment MGV-GENOME-0284031_CDS_0059 M V ---A ---E Y I K R ----------M -Y -K -E -D -T E -----------L S D K I F K A E R G L K (60)
M + + LSD + + ++
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L -E -E -A -A S -I L S L I V F Q A E T L S D Q A N E L A N Y I R
MGV-GENOME-0284031_CDS_0059 T L D -L D K R E K E L L I S Q V Q K M K A Y Q E V L Q A R I ----K Y A I E K -G ---K K (108)
E E + ++ M+A + + +
AcrIE1 R --Q -G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I D R D V D
MGV-GENOME-0284031_CDS_0059 3 AcrIIC4 0.58 View Alignment MGV-GENOME-0284031_CDS_0059 M V --A E Y I K R ------------M Y K ----E D T E ----L S D K I F K A E R G L K T L D L D K R E K E (60)
M K + + A K+ K E
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E P I K G L F K S A V E Q F S S A R D F F K N E N Y S K E L A E
MGV-GENOME-0284031_CDS_0059 -L L I S Q V Q K -M -K A Y -Q E -V -L -Q -A R I K Y A I E K G -K K (98)
I A G
AcrIIC4 K F N K E ----A -V N E -A -V E -K -L -Q K A I D L A E K Q G I Q F
MGV-GENOME-0284031_CDS_0059 4 AcrIF23 0.57 View Alignment MGV-GENOME-0284031_CDS_0059 M -V A -E Y I K ---R ----------------M Y ---K ----------E D -------------(60)
M + Y
AcrIF23 M T N F Q T W L D S A D -I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L -S P R G I D A R A V A K T
MGV-GENOME-0284031_CDS_0059 --------------------T E -----L --------S ----D K I F K -A -E R -G L -K T L D L (120)
+ + +
AcrIF23 F G G R A L T G T A R Q K E W A E K I R A -E K V Q Q -M N Q D Q A E M -A C D P S G L L T A -A -K F -W I E N R N D
MGV-GENOME-0284031_CDS_0059 D K R E K E L L I S Q V Q K M K A Y Q ----E -V L Q ----A R -I -K -Y -A I E K G ---K K (171)
E + Q A + Q A+
AcrIF23 S A Q E I A G F V M Q Q K A L L A Q H R S A K -A A G Q A D K V A K I -A -A -E Y N A L T A R W G F
MGV-GENOME-0284031_CDS_0059 5 AcrIC3 0.53 View Alignment MGV-GENOME-0284031_CDS_0059 M V A E ---Y I K R -------------M Y K E D ----T E ---L S D -------K I F -K A E R -G L -(60)
M + R + ++
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V V A S S G Q V K F M A D K T D R G L E S R F L V P E A G N R R I -E V A -L
MGV-GENOME-0284031_CDS_0059 --K -T L D L D K R E K E L L I S Q V Q K M K A Y Q E V L Q A R I K Y A I E K G K K (103)
L++ L+ +V L A +
AcrIC3 T G -R D L E A A N A L F S E L A A S V E A T N E M Y R E L D A E R A Q I N K A L E G
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;