3D Structure for MGV-GENOME-0279977_CDS_0002 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold with pLDDT = 93.35 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see: Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0279977_CDS_0002 1 AcrIIA7 0.90 View Alignment MGV-GENOME-0279977_CDS_0002 M R K V I A E A N D I S F G A A I L L V K D G Y K I Q R K G W N G K E Q Y V E L --A T C L S Y K N ---A ----A G (60)
M A+ +K G + RKGWNGK + L +
AcrIIA7 M -T -F G --------Q A L E S L K R G H L V A R K G W N G K G M F I F M R P E D S L P T N M I V N -Q V K S L P
MGV-GENOME-0279977_CDS_0002 -E -I ----I N V E H -Q D ----I --G N Q A L A F V G T R G V Q -I G W L A S Q S D M L A N D W R A F R (117)
+ H + L G GWLASQ+DMLANDW +
AcrIIA7 E -S -F K R W V A N N H G D S E T D R -I K F T A Y L C M K A A D G T I V N G W L A S Q T D M L A N D W V I V E
MGV-GENOME-0279977_CDS_0002 2 AcrIE9 0.84 View Alignment MGV-GENOME-0279977_CDS_0002 M R K V I A E A N -D I S F G A A I L L V K D G Y K I Q R K G W N G K E Q Y V E L A T C L -S -Y K N A A G E I I N V E (60)
M I + G I+ G +
AcrIE9 M E M Q I --N -S -R K ----L -----G R T I T F S R P -G A S Y --------I -F -A D L --------
MGV-GENOME-0279977_CDS_0002 H -Q -D I G N --Q A -L A F V G T R -G V Q I G W L A ---S ----Q ----S D M L A N -D W R A F R (115)
++ + + G L R
AcrIE9 -N -G ---K S G T L G -C Q I C S G G G T M G S T L S Y D G D D Q A Q F E A I C R R W Y R -A H V R G -E
MGV-GENOME-0279977_CDS_0002 3 AcrIC3 0.82 View Alignment MGV-GENOME-0279977_CDS_0002 M R K V -I A E A N D I S F G A A I -L L V K D G Y K I Q R K G W N G K E Q Y V E L A T C L S Y K N A A G E I I N V -E (60)
M N + L + + G A + + +
AcrIC3 M S I Q V T -S T N ---G R T V -N L E -I E L G S V V A S S --G Q V K -F M -A D ---K -T -D R G L E S R F L
MGV-GENOME-0279977_CDS_0002 H Q -D -I G N -Q A L -A F V G T -R G -V Q -I G W L -------A S Q S -D M L A ----N -D ----W R A F (120)
GN + + + ++ M +A
AcrIC3 V P E -A -G N R R -I E V A L T G R D L E -A A N A L F S E L A A S V E A T N E -M Y R E L D A -E -R A Q I N K A L
MGV-GENOME-0279977_CDS_0002 -R (122)
AcrIC3 E G
MGV-GENOME-0279977_CDS_0002 4 AcrIIA12 0.81 View Alignment MGV-GENOME-0279977_CDS_0002 M R K V I A E A N D -I S F G A A I L L V K -D G Y K I Q R -K G W -N G --K -E Q Y V E L A T C L S Y K N A A G E I (60)
M K +I +K + N QY + AG
AcrIIA12 M S K T M ---Y K N -D V I E L I K N A K T N N E E L L F T S V E R N T R E A A T Q Y F R C P E -K -H V S D A G V -
MGV-GENOME-0279977_CDS_0002 I N V E H Q D I G N Q A L A F V G T R G V Q I G W L A S Q S D M L A N D W R A F R (101)
E +
AcrIIA12 Y Y G E D -F E -F D G F E I F -E D D L I Y T R S ----Y -D K E ---E L N
MGV-GENOME-0279977_CDS_0002 5 AcrIIA4 0.81 View Alignment MGV-GENOME-0279977_CDS_0002 M R K V I A E A N D I S F G -A A I L L V K D -G Y K I Q R K G W -N G -K E Q Y V E L A T C -L S Y K N A A G E I I N (60)
M I +I +K Y + G + + + N G
AcrIIA4 M -N -I N --------D -L I R E I K N K D Y T V K L S G T D S N S ------I T Q L I -I R V N N D G N E Y V
MGV-GENOME-0279977_CDS_0002 V E H Q D I G N Q A L A -F V -G ----T -R G V Q I G W L A S ---Q -S -D M -L -A -N D -W R A F R (115)
+ ++ + V + D
AcrIIA4 I S E S E -N E S ---I -V E K F I S A -F K N G W N Q E Y E D E E E F Y -N D -M -Q -T I T L K S E L N
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;