3D Structure for MGV-GENOME-0279464_CDS_0084 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 92.64 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0279464_CDS_0084 1 AcrIE6 0.76 View Alignment MGV-GENOME-0279464_CDS_0084 M E T Q Q Q I D I L E S R Q L E L R -A -I M -A -K S -D D R A A K C I K S D L D F R A ---T Y P L D Y E E Y E A A (60)
M + + ++LE+ D + Y + Y+++
AcrIE6 M -N -N D T E V L E Q Q I ----K -A -F E -L -L A D ----E L K D R L P T L E I L S P M Y T A V M V T Y D L I
MGV-GENOME-0279464_CDS_0084 N A E Y N A N E K T L A E L R A -R R -A E E L I A E E T V M D F -Q N L E Q (99)
L+E+ + A+ ++ NL
AcrIE6 G K Q L A S R R A E L I E I L E E Q -Y P G H A -A D L S I ---K -N L C P
MGV-GENOME-0279464_CDS_0084 2 AcrIE1 0.64 View Alignment MGV-GENOME-0279464_CDS_0084 M -E ----T Q Q Q I D ----I -------L -E S -R -Q -------L -E L R A I M A K S D D R A A K C -I (60)
M Q + + + +A
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S -L -E E -A -A S I L S L I V F -Q A E T L S D Q A N E L A N Y I R
MGV-GENOME-0279464_CDS_0084 K S D L D F R A -T Y P L D Y E E Y E A A N A E Y N A N E K T L A E L R A R R A -E -E -L I A -E E -T V M D F Q N -(120)
+ EE E A + +E+ + + + D
AcrIE1 R -------Q ----G L E E A E G A C R N I D I M R A K W V E V C G E V N Q -H -G I R V Y -G D -A I D ---R
MGV-GENOME-0279464_CDS_0084 L E Q (123)
AcrIE1 D V D
MGV-GENOME-0279464_CDS_0084 3 AcrIIC4 0.59 View Alignment MGV-GENOME-0279464_CDS_0084 M E -T Q Q Q I D ---------I L E S -R Q L E L R A I M A K S D D R A A K C I K S D L D F R A T Y P -L D Y E -(60)
M T+++ L R A+ S DF +
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S -V L P K N H R E P I K G L F K S A V E Q F S S A R D F F K N E -N ----Y
MGV-GENOME-0279464_CDS_0084 ---E Y E -A -A N A -E Y N -A N E K T L A E L R A R R A E E L I -A E E T V M D F Q N L -E Q (110)
+ E+ + + E
AcrIIC4 S K E L -A E -K ---F N K -E ----A V N E A V E K L Q K A I D L -A E K --Q G -I -Q -F
MGV-GENOME-0279464_CDS_0084 4 AcrIF23 0.59 View Alignment MGV-GENOME-0279464_CDS_0084 M -E T Q Q Q I D ----I L E ---------S ---------R Q -----------------------(60)
M Q+ +D + +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N -Y A A N T R R A S L S P R G I D A R A V A K T F
MGV-GENOME-0279464_CDS_0084 --------L ---E L R ----A I M A K ----S D D R A ----A -K C -I -K -S D -L D F R A T Y P L D Y (120)
+ E A + + +
AcrIF23 G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A C D P -S G -L -L -T A -A K F W I E N R N D S A
MGV-GENOME-0279464_CDS_0084 E E Y E A A N A E Y N A N E K T L A E L R A R R -A E E L I -A E E T V M D F Q -N -L ---E Q (169)
E A + ++A A+ ++ + +
AcrIF23 Q E I A G F V M Q Q K A L L A Q H R S A K A A G Q A D K V A K I A A E Y ---N A -L T A R W G F
MGV-GENOME-0279464_CDS_0084 5 AcrIC3 0.57 View Alignment MGV-GENOME-0279464_CDS_0084 M E --T Q Q Q I D ---I -L E ---S -R Q -L E L R A ---I M A K S D D R A A K C I K -S D -L D F R -A T Y -(60)
M +++ E + K+D + + R +
AcrIC3 M S I Q V T S T N G R T V N L -E I E L G S V -V A S S G Q V K F M A D K T D R G L E S R F L V P E A G N -R R I -E V
MGV-GENOME-0279464_CDS_0084 P -L D Y E E Y E A A N A E Y N A N E K T L A E L R A R R A E E L I A E E T V M D F -Q N -L E Q (109)
L + EAANA + ++ E + + LE
AcrIC3 -A L T G R D L E A A N A L F S E L A A S V E A T N E M Y R E L D A E R A Q --I -N K -A L E G
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;