3D Structure for MGV-GENOME-0277872_CDS_0083 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 90.55 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0277872_CDS_0083 1 AcrIE6 0.74 View Alignment MGV-GENOME-0277872_CDS_0083 M A R N Y E T A L A E L N S S K A E L A E I K A M T D E K A C Y M Y N V ----D S K S E I V K I L S E E I E S L E R E (60)
M E + + + + E+K ++ + S E
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K D R L P T ---L E I L -S P M Y T A V M V T Y D L I G K Q L A S R R A E
MGV-GENOME-0277872_CDS_0083 -V E Y L ---T P E I -Y ---E --Y --N Y (85)
+E L P
AcrIE6 L I E I L E E Q Y P G H A A D L S -I K -N L C P
MGV-GENOME-0277872_CDS_0083 2 AcrIF2-IC2 0.60 View Alignment MGV-GENOME-0277872_CDS_0083 M -A R N Y E T A L A E L N S S K A E L --A -E I K A -M T -D ---E -K A C Y M Y N V D S K -----------(60)
M ++ ++ + A A + A D + Y+ D
AcrIF2-IC2 M A T K T A Q M I A Q Q H K D T V A A C E A A E -A I A I -A K D Q V W D G E G Y T K Y T F D D N S V L I Q S G T T Q Y
MGV-GENOME-0277872_CDS_0083 ---S E I V K I L S E E I E S L E R E V E Y L -T ----P -E I Y E Y N -Y (100)
+ + + ++ L+ E+ + +
AcrIF2-IC2 A M D A D D A D S I K G Y A D W L D D E A R S A E -A S E I E R L L E S V E E E
MGV-GENOME-0277872_CDS_0083 3 AcrIE1 0.60 View Alignment MGV-GENOME-0277872_CDS_0083 M A R ---N -Y E T -A L -------------A -E -L N S ----S -K A E L -A E I K A M -T -D -E K A C (60)
M + ++ S + E A
AcrIE1 M E K K L S D A Q V -A L V A A W R K Y P D L R E S L E E -A -A S I L S L -I V F Q -A E T L S D -Q -A -N E L A N
MGV-GENOME-0277872_CDS_0083 Y M Y ---N V ---D S K S E I V K I L S E E I E S L E R E ----V E Y L T P -E -I Y -E -Y -N Y (113)
Y + + + I + E + I
AcrIE1 Y -I R R Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D -A I -D -R -D V D
MGV-GENOME-0277872_CDS_0083 4 AcrIIC4 0.59 View Alignment MGV-GENOME-0277872_CDS_0083 M A -R --N Y E T ------------A L A ----E L N S S K A E L A E I K A M T D E K A -C Y M -Y N V -D S (60)
M N T + + ++E + +
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E P I K G L F K S A V E Q F S S A R D F F K N E -N -Y S K E L
MGV-GENOME-0277872_CDS_0083 K S E I V -K -I L -S E E I E S L E R E V E Y L T P E I Y E Y N Y (94)
+ +E +E L + ++ +
AcrIIC4 A E K F N K -E A -V N E A V E K L Q K A I D L A E K -Q G I Q -F
MGV-GENOME-0277872_CDS_0083 5 AcrIF2 0.56 View Alignment MGV-GENOME-0277872_CDS_0083 M -A R N Y E T A L A E L N ---S ---S K A E L A -----E I K A M T D E K A C Y M Y -------N -V --D -(60)
M A + +A K + +
AcrIF2 M I A Q Q H K D T V A A C E A A E A I A I A K D Q V W D G E G Y T K Y T F D -D N -S V L I Q S G T T Q Y A M -D A -D
MGV-GENOME-0277872_CDS_0083 S K S -E -I V K I L S E -E I E S L E R E V E Y L T -P -E I Y E Y N -Y (98)
+K + + + +
AcrIF2 -D A D -S -I K G Y A D W L D D E A R S A E A S E I E -R L L E S V E E E
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;