3D Structure for MGV-GENOME-0271324_CDS_0016 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 92.86 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0271324_CDS_0016 1 AcrIE6 0.73 View Alignment MGV-GENOME-0271324_CDS_0016 M N K D L ---I D F Y E A E K -L K L E -R E I S D L W E V G K K S S R R K -N R L -I E I E Y I L N G L -Y A -N K (60)
M ++ L + L + S + + I +
AcrIE6 M -N N D T E V L E Q Q I K A F E L L A -D E L K D R L P T L E I L S P M -Y T A V -M V T Y D L I G K -Q L A -S -R
MGV-GENOME-0271324_CDS_0016 E N A R L R Q E N K D L -K L R L E K E G -I -D I -D N -D C (92)
A L + ++ N
AcrIE6 -R A E L I E I L E E Q Y P G H A A ---D -L S -I K N L C P
MGV-GENOME-0271324_CDS_0016 2 AcrIE1 0.64 View Alignment MGV-GENOME-0271324_CDS_0016 M N --K -D -L I D F Y E ---A E K L K L E R E I S D L W E V -G K K -S S -R R K -N R L I E I E Y I L N G L Y A (60)
M + L + ++ + + + ++N +
AcrIE1 M E K K L S -D A Q V A L V A A W R K Y P D L R E S L E E A A S I L -S L I V -F Q A -E T L S D Q A N E L A N Y I R R
MGV-GENOME-0271324_CDS_0016 --N K ---E N --------A R L R Q E N K D L K L R L E K E G I D I D -N D -C (104)
A+ ++ + + D+ D
AcrIE1 Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I D R D V D
MGV-GENOME-0271324_CDS_0016 3 AcrIF23 0.62 View Alignment MGV-GENOME-0271324_CDS_0016 M N K --D L I D ---F Y E -------------------A ----E K ----------L --------(60)
M+ +D
AcrIF23 M T N F Q T W L D S A D I P -V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N -T R R A S L S P R G -I D A R A V A K
MGV-GENOME-0271324_CDS_0016 ------------------K L E R E I S D L W E V -G K K -S S R R K N -R L I E I E Y I L N G L Y A -N K E (120)
K+ E + L + + E
AcrIF23 T F G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A C D P -S G L L T A A K F W I E N R N D S A Q E
MGV-GENOME-0271324_CDS_0016 N A R ---L R Q -E -N K ----D L --------K L R -L -E K E G I D I D N -D -C (167)
A + ++ E +
AcrIF23 I A G F V M Q Q K A -L -L A Q H R S A K A A G Q A D K V A K I -A -A E Y N A L T A R W G F
MGV-GENOME-0271324_CDS_0016 4 AcrIC3 0.57 View Alignment MGV-GENOME-0271324_CDS_0016 M N K D L I ---D ---F Y E ----------A ----E K -L K L E R E I ---S D L W E V -G --K K S S R R (60)
M+ + E K +R + + E+
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V V A S S G Q V K F M -A D K T D R G L E S R F L V P E A G N R R I E V A L T
MGV-GENOME-0271324_CDS_0016 K N R L I E I E Y I L N G L Y A N K E N -A R L -R Q -E N K D L K L R L E K E G I D I ---D N D C (111)
L + + + A N + L+ E + I
AcrIC3 G R D L E A A N A L F S E -----L -A A S -V E -A T N E M Y R E -L D A E R A Q I N K A L E -G
MGV-GENOME-0271324_CDS_0016 5 AcrIIA32 0.52 View Alignment MGV-GENOME-0271324_CDS_0016 M -N --------K D L I D ----F ---------Y E ----A --------E K L K L E R E I -S D L -W (60)
M N K + + +
AcrIIA32 M K N E D G K L V V S K A H F G N M I R N C Q S V E D F K K S F E R L T Y Y S S E N R E S T V R Q R L K I A E K E -Y N
MGV-GENOME-0271324_CDS_0016 E -V -G -K K -----S -S -R R K -N R -L I E I E Y I L N G L Y A --N K E N ----A R L R Q E -------(120)
K L + L+ + R
AcrIIA32 -F -K A G V K E D L E I K N -T -T D K -E I L D Y V R N E L S K -I D S K K Q A D K N W S E K N R E H R N Y L S K R
MGV-GENOME-0271324_CDS_0016 -----N -K ---D L K L R L E K E -G I D I D N -D C (150)
+ L I+
AcrIIA32 S S A R S F I -N N N A T H E D L L E -L K K I I E E K L K
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;