3D Structure for MGV-GENOME-0268377_CDS_0030 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 88.11 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0268377_CDS_0030 1 AcrIE6 0.72 View Alignment MGV-GENOME-0268377_CDS_0030 M K -T E I ---E I R N K L K E Y E E N -I E -F L E T S L -------K -D K K -------T I E E L K R E -S (60)
M + L T ++ + E
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K -D R L P T L -E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L I
MGV-GENOME-0268377_CDS_0030 I -I L K W V -L ----G E V --K --K I (83)
IL ++ K
AcrIE6 -E I L E E -Q Y P G H A A D L S I K N L C P
MGV-GENOME-0268377_CDS_0030 2 AcrIIC4 0.56 View Alignment MGV-GENOME-0268377_CDS_0030 M -K ---T E I E I R -------------N --------K L K E Y E E N I E F L E T S L --------K -(60)
M + + I K E+ +
AcrIIC4 M K I T S S N F A T I -A T S E N F A K L S V L P K N H R E P I K G L F K S A V E Q F S S A R D F -F K N E N Y S K E L
MGV-GENOME-0268377_CDS_0030 D K -K -----T I E E L K R E S I I L K W V L G E V -K -K I (93)
+ E+ + ++
AcrIIC4 A -E -K F N K E A V N E A V E K L Q K A I D L A E K -Q G I Q F
MGV-GENOME-0268377_CDS_0030 3 AcrIF25 0.54 View Alignment MGV-GENOME-0268377_CDS_0030 M K ----------------------------------------------T E I E I R -N ---K (60)
M + +E+
AcrIF25 M D N D D K K P D A L I H L R V P A E V K G R W V K E S R L E G M K L T D W I T G R V E A K A L S I A E V L E E A A A M
MGV-GENOME-0268377_CDS_0030 L ---K --------E ----Y -E -E N I E F L E T S L ---K D K ----K -----------------(120)
+ +I D
AcrIF25 A R S L E D S P I F Y R N K L C A D -G -I V T I Q Q Q A A R F S A A T D D A T R L D A A L W A R E G Y Q L L S S G L P
MGV-GENOME-0268377_CDS_0030 -------------------T -I -E -E -L K R ---E S I I L K W V L G E V -K -K -I (171)
+ LG + K
AcrIF25 D S Y S G A V P N E G R T G W V T A S Q M -A -R -L F G G E A L W I E R C Q Q E L G G A G K E D G R
MGV-GENOME-0268377_CDS_0030 4 AcrIE1 0.51 View Alignment MGV-GENOME-0268377_CDS_0030 M -K ----T E I E I R ------N --------K -L -K -E -Y -E E --------N I E -F L E T -S L -(60)
M K + + + +
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E E -A -A -S -I -L -S L I V F Q A E T -L S D -Q A N E L -A
MGV-GENOME-0268377_CDS_0030 ----K ----D K K -----------T I E E L K R E -S -I -I -L -K -W V L G E V K -K --I (114)
+ + E+ E V G++ +
AcrIE1 N Y I R R Q G L E E A E G A C R N I D I M R A K W V E V C G E V -N -Q -H -G -I R V Y G D A I D R D V D
MGV-GENOME-0268377_CDS_0030 5 AcrIF12 0.51 View Alignment MGV-GENOME-0268377_CDS_0030 M -K ----T E I E I R N K L ------K E Y E ----E N -I E F L E T -S L ------------------(60)
M + L + E +
AcrIF12 M A Y E K T W H R D Y A A E S L K R A E T S R W T Q D A N L E -W T Q L A L -E C -A Q V V H L A R Q V G E E L G N E K
MGV-GENOME-0268377_CDS_0030 ----------------K ---------------D K ---K T -I -E -E ----L K -R -E ----S (120)
+ T +
AcrIF12 I I G I A D T V L S T I E A H S Q A T Y R R P C Y K R I T T A Q T H L L A V T L -L -E -R F G S A -R -R -V A N A V
MGV-GENOME-0268377_CDS_0030 I -I -L -K -W V L G E V K K I (137)
+ + K+
AcrIF12 W Q -L -T -D D E I D Q A -K A
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;