3D Structure for MGV-GENOME-0265569_CDS_0034 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 97.44 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0265569_CDS_0034 1 AcrIIA33 0.86 View Alignment MGV-GENOME-0265569_CDS_0034 M I K W T G K S T D K R W I R T V E A E T Y R E L M E T L V D K G Y I G H Y I D S D S Q L F H E L A Y A S Q D V A E L E (60)
MIKWTGKSTDK WIRTVEAETY L ETLVDKGYIG YIDSDSQLFHELAY+S VA+LE
AcrIIA33 M I K W T G K S T D K G W I R T V E A E T Y Y K L L E T L V D K G Y I G D Y I D S D S Q L F H E L A Y V S P A V A D L E
MGV-GENOME-0265569_CDS_0034 D R L N D E D Q T E Q A L I D L E N F D W D R V F D K L T D Q Q F T T A I A G C T S Q A Y Y Q E F E V I Q (113)
DRLNDE Q EQAL DLENFDW RVF+KLTDQQF+TAIAGCTSQAYYQEFEVI
AcrIIA33 D R L N D E H Q V E Q A L E D L E N F D W N R V F E K L T D Q Q F Q T A I A G C T S Q A Y Y Q E F E V I E
MGV-GENOME-0265569_CDS_0034 2 AcrIIA27 0.57 View Alignment MGV-GENOME-0265569_CDS_0034 M I K W T G K --S -T ----D -----K R W I R T V E A E T Y R E L M E T L V D K G Y I G H Y I D S -D S Q L F H (60)
M ++ I VEA + RE+ + + Y
AcrIIA27 M K T F N I I V S E S A N L K E H S S E L V D N I I Y K V E A K N R R E A F K K A R E E -----Y S F -S S K ----
MGV-GENOME-0265569_CDS_0034 E L A Y A S Q D V A E L E D R -L N -D E D -Q T E Q A -L I -D L -E N F D W D R V F D K L T D Q -Q F T T A I A G C (120)
D+
AcrIIA27 -W K F N M R D L T A ----I -D N ---T -----H -R R A W G --------------R R ---------
MGV-GENOME-0265569_CDS_0034 T S Q A Y Y Q E F E V I -Q (134)
E
AcrIIA27 Y ----L R V -E --E A
MGV-GENOME-0265569_CDS_0034 3 AcrIE2 0.57 View Alignment MGV-GENOME-0265569_CDS_0034 M I K W T G K -S T D --K R -W I R T V E A E T Y R E L M E T L V D K G Y I G H Y I D S D -S Q L F H E L A Y A S Q D (60)
M TV+A + +++
AcrIE2 M N T Y L I D P R K N N D N S G E R F T V D A V D I T A A A K S A A Q Q -I -------L G -E E ----F E G L V Y
MGV-GENOME-0265569_CDS_0034 V A -E L E D R L N D E D Q T E Q A L I D L -E N F D W D R V F D K L T D Q Q F T -T A I A G C -T -S Q A Y Y Q E F E (120)
+ + +L ++ T T +
AcrIE2 -R E -----T G E S ------N ---G --S G M F Q A Y H H L H G T N R T E T T V --G Y -P ----F H V -M
MGV-GENOME-0265569_CDS_0034 V I Q (123)
AcrIE2 E -L
MGV-GENOME-0265569_CDS_0034 4 AcrIIA26 0.56 View Alignment MGV-GENOME-0265569_CDS_0034 M I K W T G K -S -T -D -----K R W I R T V E A E --------------------------------(60)
M K + +
AcrIIA26 M K K L Y I Q T N Q F A N G E L Q V E N -T S Y E L C D T F K E L Y S V A S N L V D E N T L N F V E D N F I E Q N Y K D
MGV-GENOME-0265569_CDS_0034 T Y R E L M E T L V D K G -Y I -G H -Y I D S --D ----S -Q L -F H E L -A Y -A -S -------Q D V A E L (120)
Y + E+ D G ++ ++A
AcrIIA26 E Y N G V Y E N D G D T -G E F V G -Q V F E N K V T E E Q F -K E -L L E Q -L E -I -T -Y T E F D P E E E L A K C
MGV-GENOME-0265569_CDS_0034 E D R L -N D E D ---Q -T -E Q -A -L -I -D L E N F D W D R V F D K -L -----------T D Q Q F T -T A (180)
+ + LE+ + + + Q
AcrIIA26 I A N K N R K S E F Y G N G -L K -V -I -A -E Y L E S I S H E D A L -A V -V T Y Y Y F Y F G F G Y E D Q L I S -D
MGV-GENOME-0265569_CDS_0034 I A G C T -S Q A Y Y Q E ---F E V I Q (201)
I + + E
AcrIIA26 I K D D Q E D G V K F E H V E R S E T -I
MGV-GENOME-0265569_CDS_0034 5 AcrIIC5 0.55 View Alignment MGV-GENOME-0265569_CDS_0034 M I --K -W T G K S T D K R W I R T V E A E T Y R E L M E T L V D K G Y I G H Y I D S D S Q L F H E L A Y A S Q D -V (60)
M + D R + T + + I Y
AcrIIC5 M N N S I K F H V S Y -D G T A -R A L -F N T K E Q A E K Y -C ---L V E E -I --N D E M N G ---Y ---K R -
MGV-GENOME-0265569_CDS_0034 A E L E D R L N D E --D Q T E Q A L I D -L E N F D W D R V F D K L ---T -D Q Q ---F -T -T -A I A G ----(120)
E++L +E + + + +F + ++ +
AcrIIC5 K S W E E K L R E E N C A S V Q D W V E K N -Y T S S Y S D L F N -I C E I E V -S S A G Q -L -V -K I D N T E V D D
MGV-GENOME-0265569_CDS_0034 ----C -T S Q A Y -------------Y Q E --F E V -I Q (155)
Q +
AcrIIC5 F V E N -C Y G F T L E D D L E E F N K A K Q Y L Q -K F Y A E C E N
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;