3D Structure for MGV-GENOME-0265239_CDS_0041 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 82.77 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0265239_CDS_0041 1 AcrIB9 0.72 View Alignment MGV-GENOME-0265239_CDS_0041 M F -K L R K R L K E -I D D I Q N E L K -N -K L L T E E K L Y K F Y L E -R K -I D E I N A R L K H N L S Y S I -E (60)
M + L K+ + + + + ++
AcrIB9 M N K F A ---F E -N -------D -K -Y -L E R N I K A V V E K I A R -D F N L H L K S K Y S K D C E F T V V A
MGV-GENOME-0265239_CDS_0041 H N T E S -I -R A -D G W R F F D -----M ----------------S W ---T -I S V K I K I S N I E I K (120)
N+ F + + +
AcrIB9 D N S F D N -I E -N -S T I F L E I K R N D -G K A C Q D H H I Y A E Y E C D E D D N E Y I A L T V K F Y G S S A S N
MGV-GENOME-0265239_CDS_0041 K F T Y V T ---H S N I T K K D I Y K A I L R Y I N ----S ----K P I S Y -F I K L ----D K K I E -D L -E (180)
+S+ I ++ K + +
AcrIB9 Q I -N T V Q G I K S S K Y A S C I V S D T D N Q L S K S I H -E L N L K K E K E Q Q -E A W N K K E A E Y A R -K K Q
MGV-GENOME-0265239_CDS_0041 K H -N ---------I E L D -K ----K K L N -L E -E E L -K -K I I (220)
++ + I
AcrIB9 A -Y -V S Q S Q R E K Y E D I -F -D L P F D F Y D Y I -D K K E Q -G L -I
MGV-GENOME-0265239_CDS_0041 2 AcrIB2 0.59 View Alignment MGV-GENOME-0265239_CDS_0041 N /A (3)
N/A
AcrIB2 N /A
MGV-GENOME-0265239_CDS_0041 3 AcrIF4 0.57 View Alignment MGV-GENOME-0265239_CDS_0041 M F K L R K R L K E I D D I Q N E L K N K L L T E E K L Y K F Y L E R K I D -E I N A R L K H N L S Y S I E H N T E S I (60)
M + I + I+ N
AcrIF4 M M -T --I ---S K T D ---I D C Y ----L Q T --------Y V V -I D P V -S N G W Q W G I D E N G ---
MGV-GENOME-0265239_CDS_0041 -R A D -G W R F F D M S -W T I S V K I K -I -S N I -E I K K F T Y V T H S N I T K K D I Y K A I L R Y I N S K P I (120)
N + T K++ A+L Y+
AcrIF4 V -G -G -A -L -H H G R -V -E --M V E -G E N G Y F G -L R G ---A T H P T E K E A M A A A L G Y L W K C --
MGV-GENOME-0265239_CDS_0041 S Y F I K L -D -K K I E D L E K H N I E L D K K K L N L E E E -L K K I I (158)
+ + + + E + +
AcrIF4 ------R -Q D L V A I -------A R N D A I E A -E K Y -R A K A
MGV-GENOME-0265239_CDS_0041 4 AcrIC3 0.56 View Alignment MGV-GENOME-0265239_CDS_0041 M F K L R K R L K E I D D I Q N E L K N K L L T E E K L Y K F Y L E R K I D E I N A R L K H -N -L S Y S -I E H N T E (60)
M + R
AcrIC3 M S --I Q V T S T ----N ---------------------G -----R ---T -V --N L E -I E L --
MGV-GENOME-0265239_CDS_0041 S I R A D G W -R F F D M -S W T -I S V K I K I S N I E I K K F T Y V T H S N I T K -K -D I Y K A I L -----R Y (120)
G + K +F + I R
AcrIC3 -----G S V -V A S -S -G Q V K F M A D K T D R G L E S R F -L -V P -----E -A -G N R R I E V A L T G R D
MGV-GENOME-0265239_CDS_0041 I N S K P I S Y F I K L D K K I E D L E K H N I E L D K K K L N L E E E L K K I I (161)
+ F L +E ELD ++++ L
AcrIC3 L -E A A N A L F S E L A A S V E A T N E M Y R E L D A E R A Q I N K A L -E -G
MGV-GENOME-0265239_CDS_0041 5 AcrIIA11 0.55 View Alignment MGV-GENOME-0265239_CDS_0041 M F -K L -R K R -L K E I D --D ----I ---------------Q N E L K N K L -L T E E K L Y K F -Y L E (60)
M R D L + + + K +
AcrIIA11 M A D M T L R -Q F C E R Y R K G D F L A K D R E T Q I E A G W Y D W F C D D K A L A G R -L A K I W G I L K G I T S D
MGV-GENOME-0265239_CDS_0041 R K I D E I N A R L -K H N L S ---Y S -I E H N T E S I -R A D -G -W R F F D M S W -T -I S V K I K I S N I E -(120)
+D + K N + +
AcrIIA11 Y I L D N Y R V W -F K N N --C P M V G P L Y D D V R F -E P -L D -E -E Q -R D E -L -Y F -G V A I D D K -R R
MGV-GENOME-0265239_CDS_0041 I K K -F T Y V T H S N -------I -T K K D I Y K A I L R Y I N S K P -I -S -Y F I K -L D K K I E D L E K H N (180)
KK ++ + +++ I +KK + E N
AcrIIA11 E K K Y V I F T A R N D Y E N E C G F -N N V R E V R Q F I N G W E D E L K N -E -E F Y K -A R E K K R Q E M E E A N
MGV-GENOME-0265239_CDS_0041 I E L D K K K L N L E E E L K K I --I (200)
++E L +
AcrIIA11 N K F A E I M Q R A D E I L W N L K E D
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;