3D Structure for MGV-GENOME-0261955_CDS_0059 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 89.67 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0261955_CDS_0059 1 AcrIIA21 0.82 View Alignment MGV-GENOME-0261955_CDS_0059 M K H N N R F Y L Q L S R K I F T E -E Y S Y L S N N A K W L F V V L N E L E Q R Y A ---D -K --E -G -I F F R T (60)
M + + + ++ YS LS + +VL + + +
AcrIIA21 M D Y -D N E N Y L I P K I L L Q D D F Y S S L S A K D I L V Y A V L K D R Q I E A L E K G W I -D T D G S I Y L N F K
MGV-GENOME-0261955_CDS_0059 N E E L A K D C N F S L P T L K K A K T E L K D T D L I K I W Q A H F R V G D T K S E K H I T C Y Q I K -K (114)
ELAK + S T + + L + LI + I
AcrIIA21 L I E L A K M F S C S R T T M I D V M Q R L E E V N L I E R E R V -D V -F Y -G -Y S L P Y K T Y I N E V
MGV-GENOME-0261955_CDS_0059 2 AcrIA3 0.49 View Alignment MGV-GENOME-0261955_CDS_0059 M K H N N R F Y L Q -L S -R K I F T E E Y S Y L S N N A K W L F V V L N E L E Q R Y A -D K E G I F F -R T N ---E (60)
M L + K L E+ G
AcrIA3 M S F -Y I M -Y I K -V K E -M S E Q K Q I S L R S K Q K E L L Q R F F E I A E -V -D -E N G D L C I P L Y D S S G
MGV-GENOME-0261955_CDS_0059 E L A K -D C -N F S L P T L K -K A K -T -E L K D -T D L I K I W Q A H F R V G D -T K S ---E K -H ------(120)
+L LIK Q+ K
AcrIA3 D L T -L F K Q D ---S R K -Y Q M -Y -A Y F -R I L R L I K K -Q I F ----F I -K V K K V K -R -D K K F L C
MGV-GENOME-0261955_CDS_0059 -----I -T C -Y Q I K -K (136)
I + ++
AcrIA3 M H S N V I D Q -V K S V L E S
MGV-GENOME-0261955_CDS_0059 3 AcrIE5 0.41 View Alignment MGV-GENOME-0261955_CDS_0059 M K H N N R F Y L Q L S R -K I F T E E -Y S -Y L S N N A K W L F V V L N E L E Q R Y A D K E G I F F R T N E E L A K (60)
M I +
AcrIE5 M S ------N -D R N G -I I -N Q I I -D -Y T ------------------------G --------
MGV-GENOME-0261955_CDS_0059 D C N F S L P T L K K A K T E L K D T D L I K I W Q A H F R V G D T K S E K H --------I T C ---Y Q I K K (118)
+ ++ EL+ D I + +
AcrIE5 ---T D R D H A E R I Y E E L R A D D R I Y F D D S V ------G -L D R Q G L L I R E D V D L M A V A A E I E
MGV-GENOME-0261955_CDS_0059 4 AcrVA3 0.40 View Alignment MGV-GENOME-0261955_CDS_0059 M K -H N N R F Y L Q L S R K I F -T E E Y S Y -L -S N -N A K W L -F V V L N E L E Q R Y A D K E G I -F F R T N E (60)
M ++ ++ A L R
AcrVA3 M V G K S K I D W Q S I D W T K T N A -Q I A Q E -C -G R -A Y N T V C K M R G K L G K S H Q G A ---K S P R K D K
MGV-GENOME-0261955_CDS_0059 E L A K D C N ----F -----S ---L P T L K K A K --T -E L K D T D L I K I W Q A H F R V G D T K S E K H --(120)
+ + + KA + + D+K+
AcrVA3 G I S R P Q P H L N R L E Y Q A L A T A K A K A S P K A G R F -E T N T K A K T W T L K S -P ----D N K T Y T F T N
MGV-GENOME-0261955_CDS_0059 -----------------------------------------------I -T --C Y Q I K --- (180)
++
AcrVA3 L M H F V R T N P H L F D P D D V V W R T K S N G V E W C R A S S G L A L L A K R K K A P L S W K G W R L I S L T K D N
MGV-GENOME-0261955_CDS_0059 K (181)
K
AcrVA3 K
MGV-GENOME-0261955_CDS_0059 5 AcrIF24 0.39 View Alignment MGV-GENOME-0261955_CDS_0059 M K H N -N R F --Y -----------------------L Q L -----------------------(60)
M
AcrIF24 M N A I H I G P F S I T P A A R G L H Y G G L P H H Q W T L Y Y G P R E -M A I K T L P D S Y T S S E V R D E F S D I I
MGV-GENOME-0261955_CDS_0059 -------S R -K -I -F -T E E -Y S Y --------------------------L ---------- (120)
+
AcrIF24 A E F V I D A R -H -R -Y -A P -D V L E L V N S D G D A V L A R V A V S R L P E A L S G C I P D D R F P Y W L L T A
MGV-GENOME-0261955_CDS_0059 ---------------------S N N A K -W -L F -V V L N -E L -E Q R Y A D --K -E -G I F F R T N E (180)
S L T+
AcrIF24 S R P R L G L P V T L N E Y T A L A V E L S A P P L A -W -I T G -L L P G E V L ----T H D -A -E E W R P P T S W
MGV-GENOME-0261955_CDS_0059 E L A K D C ---N F S L P T L K K A K T E L K D T -D L I K I W Q A H F R V G --D T -K S -E K H -------I T (240)
EL + +F+ + A L + + +A + +
AcrIF24 E L R H V V G E G S F T G V S G A A A A A L L G M S A T N F R K Y T A G D ---S A A -N R -Q K I S F A A W H Y L L D
MGV-GENOME-0261955_CDS_0059 C Y Q I --K K (248)
+
AcrIF24 R L G V K R A S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;