3D Structure for MGV-GENOME-0261258_CDS_0003 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold with pLDDT = 92.48 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see: Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0261258_CDS_0003 1 AcrIE9 0.83 View Alignment MGV-GENOME-0261258_CDS_0003 M A -H K ---M P -Y S L V L D ---G K T I F E -S ------N ----Y L P -Y -M -K R -Y A D E -Q L E E F (60)
M + G + + L
AcrIE9 M E M Q I N S R K L G -R T I T F S R P G A S Y I -F A D L N G K S G T L G C Q I C S -G -G -G T M -G S T -L S Y D
MGV-GENOME-0261258_CDS_0003 N G F Y A E I R R -Y -R K V Y A F R F -Y N T K W S -R (89)
A R+ +
AcrIE9 G D D Q A Q F E -A I C R R W -----Y -R A H V R G E
MGV-GENOME-0261258_CDS_0003 2 AcrIE8 0.83 View Alignment MGV-GENOME-0261258_CDS_0003 M A H K M P Y S L V L D G K T I F E ----S -N Y L P Y M K R Y A D E Q L E E -F -N G F ---Y A E I R -R ---Y (60)
M + + ++EQ+
AcrIE8 M -T --T I -T I N T Y D P E A R F N M S -G E E A K E F F A F V E E Q A K V S G F D V Y Y D S -C --T Y -V D E E
MGV-GENOME-0261258_CDS_0003 -R K V Y A F R F Y N T K W S -R (77)
+ ++
AcrIE8 S E R F V -----E K C F Q N Y
MGV-GENOME-0261258_CDS_0003 3 AcrIIA20 0.82 View Alignment MGV-GENOME-0261258_CDS_0003 M A H K -M P Y S L V L D G -K -T I F E S N -Y L P Y M K R Y A D E Q L E E F N G F Y A E I R R ----Y ------(60)
M + N A + E +
AcrIIA20 M K N Y E -V ---T ---N -E -V K N L N T Q -V E T I G Q A V D L Y K E Y G S -N T I V W S I D K N E D L I D E V
MGV-GENOME-0261258_CDS_0003 R K V Y A -F R F Y N T K W S R (76)
+ A +
AcrIIA20 T E L V A E -Y A E K G T V I K
MGV-GENOME-0261258_CDS_0003 4 AcrIF19 0.82 View Alignment MGV-GENOME-0261258_CDS_0003 M A H K M P Y S L V L D G K T I F E S N Y L P Y M K R Y A D E Q L E E ---F N G F Y A E I R R ------------(60)
M + ++N M + E+ +E + I
AcrIF19 M K --P L H T M N Y ------D N N ---Q M -S L V Y E S Y D E Y G F E Y S V K L K I -S V R D Y R G I D V S A F
MGV-GENOME-0261258_CDS_0003 ------------Y ------------R -K V -Y A F R -F -Y N T K W S --R (106)
AcrIF19 N A F P E W E D T L R M R D R V M S V E E I E N A M I S R Y K S L F I A P P D C T Y E F D I
MGV-GENOME-0261258_CDS_0003 5 AcrIC9 0.81 View Alignment MGV-GENOME-0261258_CDS_0003 M A -H K M -P -Y S L V L D G -K T I F E S N Y L P Y M K R Y A D E Q L E E F N G F Y A E I R R ---Y -----R -(60)
M + Y + + + RY+D + +
AcrIC9 M E T K M T S -F Y K I T A Y N S Q A L Y F W G T D A D V D R Y V D W L N R D R E I N V Y A A E A I P E A E W A Q Y E G
MGV-GENOME-0261258_CDS_0003 --K V Y A F R F -Y N -T K W --S -R (81)
V
AcrIC9 R D D V L S G E E C G W D D F M S A -E A
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;